RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 A0A1W2PPR1 153 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 ANKRD30BLA7E2S9 258 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 K7EPI3 171 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 PDXKO00764 312 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 NDC80O14777 642 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 VPS26AO75436 327 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 SCGB2A1O75556 95 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 PDE5AO76074 875 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 TOXO94900 526 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 GOT2P00505 430 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 HEXBP07686 556 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 HCKP08631 526 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 HOXB7P09629 217 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 ZNF883P0CG24 379 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 HSD17B1P14061 328 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 ZNF10P21506 573 aaPredicted RBP3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 VCPP55072 806 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 MS4A2Q01362 244 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 PRKCEQ02156 737 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 HSF2Q03933 536 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 SRYQ05066 204 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 CCL14Q16627 93 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 LDLRAP1Q5SW96 308 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 SEL1L3Q68CR1 1132 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 ARMCX5Q6P1M9 558 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 LEG1Q6P5S2 330 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 LRRC8BQ6P9F7 803 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 AFTPHQ6ULP2 937 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 ABRAXAS1Q6UWZ7 409 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 STXBP4Q6ZWJ1 553 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 P4HA3Q7Z4N8 544 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 NET1Q7Z628 596 aaPredicted RBP3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 MISPQ8IVT2 679 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 ARL14Q8N4G2 192 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 SLC25A36Q96CQ1 311 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 VGLL1Q99990 258 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 FAM173AQ9BQD7 235 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 CCDC28BQ9BUN5 200 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 CCSER1Q9C0I3 900 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 EGLN1Q9GZT9 426 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 DPH5Q9H2P9 285 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 IL1RL2Q9HB29 575 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 ABCC13Q9NSE7 274 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 KLRF1Q9NZS2 232 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 IKZF3Q9UKT9 509 aa3.53□□□□□ -1.84
CDC42BPA-211ENST00000466538 A0A087WZY1 265 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 IGHV3-16A0A0C4DH30 117 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 TEX48A0A1B0GUV7 120 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 RPL37AP8A6NKH3 93 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 K7ERI5 159 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 APBB3O95704 486 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 IGSF6O95976 241 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 MT-ND1P03886 318 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 TNNI3P19429 210 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 UCP1P25874 307 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 MDH1P40925 334 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 POLR2FP61218 127 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 PPIAP62937 165 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 MRPS6P82932 125 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 PCK2Q16822 640 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 ZNF343Q6P1L6 599 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 PAQR6Q6TCH4 344 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 APOOLQ6UXV4 268 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 CCDC36Q8IYA8 594 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 CENPSQ8N2Z9 138 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 FLVCR1-AS1Q8TAF5 88 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 RASL10AQ92737 203 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 BIRC7Q96CA5 298 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 WBP1Q96G27 269 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 RBM18Q96H35 190 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 APOOQ9BUR5 198 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 TRIM9Q9C026 710 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 TRIM6Q9C030 488 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 GFRA4Q9GZZ7 299 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 LIME1Q9H400 295 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 RNF41Q9H4P4 317 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 POLD4Q9HCU8 107 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 TRPV5Q9NQA5 729 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 YAE1D1Q9NRH1 226 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 GPR83Q9NYM4 423 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 TAS2R16Q9NYV7 291 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 SENP1Q9P0U3 644 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 GHRLQ9UBU3 117 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 MLXQ9UH92 298 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 CHMP2BQ9UQN3 213 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 SNED1Q8TER0 1413 aa3.52□□□□□ -1.85
CDC42BPA-211ENST00000466538 RNF222A6NCQ9 220 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 LRIT2A6NDA9 550 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 FOXI3A8MTJ6 420 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 WASH3PC4AMC7 463 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 E2F3O00716 465 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 TYROBPO43914 113 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 RANBP6O60518 1105 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 SMPD2O60906 423 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 DIRAS3O95661 229 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 SEMA4FO95754 770 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 KRT6BP04259 564 aa3.51□□□□□ -1.85
CDC42BPA-211ENST00000466538 ETV5P41161 510 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms