RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 TRA2BP62995 288 aaKnown RBP3.11□□□□□ -1.91
PTPN12-210ENST00000464313 ZNF85Q03923 595 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 ZNF33BQ06732 778 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 WASHC5Q12768 1159 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 RUNX3Q13761 415 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 PDK1Q15118 436 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 LINC00242Q5T6M2 205 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 ATRAIDQ6UW56 229 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 CWC27Q6UX04 472 aaKnown RBP3.11□□□□□ -1.91
PTPN12-210ENST00000464313 DPY19L2P2Q6ZN68 376 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 TAF8Q7Z7C8 310 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 COLGALT1Q8NBJ5 622 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 ZNF397Q8NF99 534 aaPredicted RBP3.11□□□□□ -1.91
PTPN12-210ENST00000464313 BEST4Q8NFU0 473 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 TBCKQ8TEA7 893 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 LHX4Q969G2 390 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 APOL2Q9BQE5 337 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 CBWD1Q9BRT8 395 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 AMBNQ9NP70 447 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 ESM1Q9NQ30 184 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 STARD5Q9NSY2 213 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 CUTCQ9NTM9 273 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 ZNF107Q9UII5 783 aaPredicted RBP3.11□□□□□ -1.91
PTPN12-210ENST00000464313 ZMYM6O95789 1325 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 ABCA7Q8IZY2 2146 aa3.11□□□□□ -1.91
PTPN12-210ENST00000464313 PTPRUQ92729 1446 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 IGHV3OR16-12A0A075B7B8 117 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 TRABD2BA6NFA1 517 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 ZSCAN5CA6NGD5 496 aaPredicted RBP3.1□□□□□ -1.91
PTPN12-210ENST00000464313 ARHGAP42A6NI28 874 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 EI24O14681 340 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 CFLARO15519 480 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 HTATSF1O43719 755 aaKnown RBP3.1□□□□□ -1.91
PTPN12-210ENST00000464313 RHBDL1O75783 438 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 PDE5AO76074 875 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 GOT2P00505 430 aaKnown RBP3.1□□□□□ -1.91
PTPN12-210ENST00000464313 ARHGDIAP52565 204 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 NME3Q13232 169 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 ZNF699Q32M78 642 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 TAF3Q5VWG9 929 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 RNLSQ5VYX0 342 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 MFSD7Q6UXD7 560 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 CCBE1Q6UXH8 406 aaPredicted RBP3.1□□□□□ -1.91
PTPN12-210ENST00000464313 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
PTPN12-210ENST00000464313 SERINC5Q86VE9 423 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 CHCHD4Q8N4Q1 142 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 LINC00612Q8N6U2 182 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 PIWIL1Q96J94 861 aaKnown RBP3.1□□□□□ -1.91
PTPN12-210ENST00000464313 NSMCE2Q96MF7 247 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 FAM173AQ9BQD7 235 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 ALG9Q9H6U8 611 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 HOMER3Q9NSC5 361 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 CENPMQ9NSP4 180 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 SPASTQ9UBP0 616 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 CLIP2Q9UDT6 1046 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 PRODH2Q9UF12 536 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 IL20RAQ9UHF4 553 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 PLA2G4CQ9UP65 541 aa3.1□□□□□ -1.91
PTPN12-210ENST00000464313 SPAG9O60271 1321 aaKnown RBP3.1□□□□□ -1.91
PTPN12-210ENST00000464313 SYNJ2O15056 1496 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 A0A0J9YVX5 310 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 PHOX2AO14813 284 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 SDC3O75056 442 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 NUDT14O95848 222 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 ECDO95905 644 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-210ENST00000464313 THY1P04216 161 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 STMN1P16949 149 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 IDSP22304 550 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 RFC2P35250 354 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 RABIFP47224 123 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 POU3F4P49335 361 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 STARD6P59095 220 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 NAAAQ02083 359 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 SLC10A1Q14973 349 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 CD226Q15762 336 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 PPP1R3AQ16821 1122 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 SHROOM1Q2M3G4 852 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-210ENST00000464313 TIMM50Q3ZCQ8 353 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 CCDC40Q4G0X9 1142 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 MS4A13Q5J8X5 152 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 TMEM26Q6ZUK4 368 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 SH2D6Q7Z4S9 175 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 ARL14Q8N4G2 192 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 CD177Q8N6Q3 437 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 OR52J3Q8NH60 311 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 ZBED6CLQ96FA7 236 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-210ENST00000464313 C19orf43Q9BQ61 176 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 SPXQ9BT56 116 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 FTHL17Q9BXU8 183 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 TSPY26PQ9H489 355 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 FAM124BQ9H5Z6 455 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-210ENST00000464313 ABCD2Q9UBJ2 740 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 RSPH14Q9UHP6 348 aa3.09□□□□□ -1.91
PTPN12-210ENST00000464313 RAD54L2Q9Y4B4 1467 aa3.09□□□□□ -1.92
PTPN12-210ENST00000464313 MFSD2BA6NFX1 497 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.08□□□□□ -1.92
PTPN12-210ENST00000464313 STK17BO94768 372 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 TGFAP01135 160 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 GSTA1P08263 222 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 CCDC192P0DO97 292 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms