RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 KPNA3O00505 521 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 CHP2O43745 196 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TSC22D2O75157 780 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 LALBAP00709 142 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 GASTP01350 101 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 HMGN1P05114 100 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 ETFAP13804 333 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 NAGAP17050 411 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 EPORP19235 508 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 ZP3P21754 424 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 MTNR1AP48039 350 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 RFX3P48380 749 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 PITPNBP48739 271 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 GBX2P52951 348 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 AP3S2P59780 193 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SNRPD1P62314 119 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 POLR2LP62875 67 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 EEF1A2Q05639 463 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 GPR17Q13304 367 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 DDX39BQ13838 428 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TSC22D1Q15714 1073 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 CHRNA6Q15825 494 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SNAPC1Q16533 368 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SYTL3Q4VX76 610 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 Q5BKY6 102 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 ZMAT1Q5H9K5 638 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 FAM69AQ5T7M9 428 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 FAM219BQ5XKK7 198 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 HBMQ6B0K9 141 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SLC27A4Q6P1M0 643 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 BHLHB9Q6PI77 547 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 FAM83HQ6ZRV2 1179 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TPRG1Q6ZUI0 275 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 RRM2BQ7LG56 351 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 KRT74Q7RTS7 529 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 PDZD3Q86UT5 571 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SERINC5Q86VE9 423 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 THOC6Q86W42 341 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TMC8Q8IU68 726 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SLC38A6Q8IZM9 456 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 CFAP52Q8N1V2 620 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 EID2Q8N6I1 236 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TCEANCQ8N8B7 351 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TMEM145Q8NBT3 493 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 FBXO15Q8NCQ5 510 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TMIEQ8NEW7 156 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 OR5T2Q8NGG2 359 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 OR5M3Q8NGP4 307 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 NEIL3Q8TAT5 605 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 GNPDA2Q8TDQ7 276 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 CXorf40AQ8TE69 158 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 OR5P2Q8WZ92 322 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 OSTF1Q92882 214 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 RNFT2Q96EX2 444 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 WDR34Q96EX3 536 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 C11orf24Q96F05 449 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 ZBED6CLQ96FA7 236 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 PDXPQ96GD0 296 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 ZNF764Q96H86 408 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 ZNF354BQ96LW1 612 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SORCS2Q96PQ0 1159 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 IL4I1Q96RQ9 567 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 DPYSL5Q9BPU6 564 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 PELOQ9BRX2 385 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 FNDC11Q9BVV2 318 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 C1QTNF7Q9BXJ2 289 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 HDHD5Q9BXW7 423 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 PPIL3Q9H2H8 161 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 OR51J1Q9H342 316 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 NARFLQ9H6Q4 476 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 CACYBPQ9HB71 228 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 MIEF1Q9NQG6 463 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TAS2R16Q9NYV7 291 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TVP23BQ9NYZ1 205 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 DNAJC27Q9NZQ0 273 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 EXTL2Q9UBQ6 330 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 REV1Q9UBZ9 1251 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 AFF4Q9UHB7 1163 aaKnown RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SLC23A1Q9UHI7 598 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 ZNF222Q9UK12 451 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SLC13A4Q9UKG4 626 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 ICKQ9UPZ9 632 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 LIPT1Q9Y234 373 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 SLC22A14Q9Y267 594 aa6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 TRIP12Q14669 1992 aaPredicted RBP6.8□□□□□ -1.32
CLSTN1-204ENST00000464286 A0A0B4J293 547 aa6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 A0A0X1KG70 313 aa6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 SLC38A8A6NNN8 435 aa6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 KDM4EB2RXH2 506 aaPredicted RBP6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 M0R233 179 aa6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 FABP7O15540 132 aa6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 LRRTM2O43300 516 aa6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 TLX2O43763 284 aaPredicted RBP6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 PLOD3O60568 738 aa6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 NBNO60934 754 aa6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 PSIP1O75475 530 aaKnown RBP6.79□□□□□ -1.32
CLSTN1-204ENST00000464286 GJB3O75712 270 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms