RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ART3Q13508 389 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 DNASE1L3Q13609 305 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TGFBIQ15582 683 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 PFKFB4Q16877 469 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TCHHL1Q5QJ38 904 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 PXDC1Q5TGL8 231 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 IYDQ6PHW0 289 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM65Q6PI78 240 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SUSD1Q6UWL2 747 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 ABRAXAS1Q6UWZ7 409 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 ZYG11AQ6WRX3 759 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 ZNF517Q6ZMY9 492 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TBC1D1Q86TI0 1168 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TRIM73Q86UV7 250 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 RNF175Q8N4F7 328 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 METTL25Q8N6Q8 603 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 OR52B6Q8NGF0 335 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 OR52E1Q8NGJ3 308 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 OSR1Q8TAX0 266 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 ACMSDQ8TDX5 336 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SKA2Q8WVK7 121 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 RSC1A1Q92681 617 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TFGQ92734 400 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 RHBDF1Q96CC6 855 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 WDYHV1Q96HA8 205 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 PDLIM5Q96HC4 596 aaKnown RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 FYTTD1Q96QD9 318 aaKnown RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 KCNA7Q96RP8 456 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SMC6Q96SB8 1091 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SORT1Q99523 831 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 GATA5Q9BWX5 397 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 ULBP3Q9BZM4 244 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TFB2MQ9H5Q4 396 aaKnown RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 RMI1Q9H9A7 625 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 AKIRIN1Q9H9L7 192 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 PPCSQ9HAB8 311 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SLCO1B3Q9NPD5 702 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 LHX9Q9NQ69 397 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 ABCF3Q9NUQ8 709 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 STOX2Q9P2F5 926 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 COPG2Q9UBF2 871 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 ASF1AQ9Y294 204 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TDRKHQ9Y2W6 561 aaKnown RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 OARD1Q9Y530 152 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 PTGDR2Q9Y5Y4 395 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 COMMD10Q9Y6G5 202 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 DCHS2Q6V1P9 2916 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 IGKV1-8A0A0C4DH67 115 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 LOC102723971A0A1B0GUV8 181 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 GPR89AB7ZAQ6 455 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 OR7A17O14581 309 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 LRRTM2O43300 516 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 STATHP02808 62 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 SLC35G4P0C7Q5 338 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 GPR89BP0CG08 455 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 CBSLP0DN79 551 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ERGP11308 486 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 CPA3P15088 417 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 PVRP15151 417 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 CD1EP15812 388 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 TAC1P20366 129 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 IDSP22304 550 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 PTPN4P29074 926 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 EPHA3P29320 983 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 EEF1DP29692 281 aaKnown RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ATP5DP30049 168 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 PKLRP30613 574 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 CBSP35520 551 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 PPARGP37231 505 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 SKIV2L2P42285 1042 aaKnown RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 SLC6A12P48065 614 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 PRKAA2P54646 552 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 KRTAP10-9P60411 292 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 TBPL1P62380 186 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF91Q05481 1191 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 BST1Q10588 318 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 FHL1Q13642 323 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 GPR18Q14330 331 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 KCNAB1Q14722 419 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 IGFL3Q6UXB1 125 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF813Q6ZN06 617 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 FAM47EQ6ZV65 393 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 NEK10Q6ZWH5 1172 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 TAOK1Q7L7X3 1001 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 SYVN1Q86TM6 617 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 GPSM1Q86YR5 675 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 MYO1HQ8N1T3 1032 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 NKAPQ8N5F7 415 aaKnown RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ST6GALNAC3Q8NDV1 305 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF740Q8NDX6 193 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 FDCSPQ8NFU4 85 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 OR5K2Q8NHB8 316 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 AGR3Q8TD06 166 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 CT55Q8WUE5 264 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ASZ1Q8WWH4 475 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 NCSTNQ92542 709 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 SH3KBP1Q96B97 665 aa3.4□□□□□ -1.87
SCFD1-204ENST00000463622 THOC1Q96FV9 657 aaKnown RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF514Q96K75 400 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-204ENST00000463622 PAIP2Q9BPZ3 127 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms