RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CIDECQ96AQ7 238 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-206ENST00000462306 LCORQ96JN0 433 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-206ENST00000462306 VSTM2LQ96N03 204 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 NUF2Q9BZD4 464 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 TSPAN10Q9H1Z9 355 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-206ENST00000462306 SACM1LQ9NTJ5 587 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 ASIC5Q9NY37 505 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 SH3BP4Q9P0V3 963 aa14.6□□□□□ -0.07
ERCC3-206ENST00000462306 C19orf53Q9UNZ5 99 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-206ENST00000462306 GPR55Q9Y2T6 319 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-206ENST00000462306 G3V3Y1 287 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 KLF11O14901 512 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 SCAMP2O15127 329 aaKnown RBP14.59□□□□□ -0.07
ERCC3-206ENST00000462306 ZIC2O95409 532 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-206ENST00000462306 PSMG1O95456 288 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 P04436 131 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 IFI6P09912 130 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 G6PDP11413 515 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 ZNF24P17028 368 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 DRD5P21918 477 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 RFC3P40938 356 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 MC3RP41968 323 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 NRG3P56975 720 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 KCNK10P57789 538 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 DCAF7P61962 342 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 MAD2L1Q13257 205 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-206ENST00000462306 ELOAQ14241 798 aaKnown RBP14.59□□□□□ -0.07
ERCC3-206ENST00000462306 NNATQ16517 81 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 TMEM107Q6UX40 140 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 GFRALQ6UXV0 394 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 ZNF551Q7Z340 670 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-206ENST00000462306 R3HCC1LQ7Z5L2 792 aaKnown RBP14.59□□□□□ -0.07
ERCC3-206ENST00000462306 RIMKLAQ8IXN7 391 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 PRR22Q8IZ63 422 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 OR2L13Q8N349 312 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 FAM13CQ8NE31 585 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 NUDT8Q8WV74 236 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 ELP4Q96EB1 424 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 HSPBAP1Q96EW2 488 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 GPR137Q96N19 417 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 BTBD9Q96Q07 612 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 FAM173AQ9BQD7 235 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 MEAF6Q9HAF1 191 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 PROK2Q9HC23 129 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 SEC14L3Q9UDX4 400 aa14.59□□□□□ -0.07
ERCC3-206ENST00000462306 EIF3LQ9Y262 564 aaKnown RBP14.59□□□□□ -0.07
ERCC3-206ENST00000462306 FRG2CA6NGY1 282 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 HMGB1P1B2RPK0 211 aaPredicted RBP14.58□□□□□ -0.08
ERCC3-206ENST00000462306 NPIPA5E9PKD4 350 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 UPK1AO00322 258 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 TO15178 435 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 ACOX3O15254 700 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 UNC5CO95185 931 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 CT45A8P0DMV1 189 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 CT45A9P0DMV2 189 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 LAMP1P11279 417 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 NAGAP17050 411 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 ABCD3P28288 659 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 HPCAL1P37235 193 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 PIGAP37287 484 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 DNASE1L1P49184 302 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 FBXW4P57775 412 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 FOXO1Q12778 655 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 RPS6KA2Q15349 733 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 KRTCAP3Q53RY4 240 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 CT45A2Q5DJT8 189 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 NPSR1Q6W5P4 371 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 FAM47EQ6ZV65 393 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 LARP4Q71RC2 724 aaKnown RBP eCLIP14.58□□□□□ -0.08
ERCC3-206ENST00000462306 LRRC34Q8IZ02 419 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 FBXW8Q8N3Y1 598 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 FAM26EQ8N5C1 309 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 KRTCAP2Q8N6L1 136 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 OR7A2PQ8NGA2 310 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 OR5M3Q8NGP4 307 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 ZNF75CPQ92670 426 aaPredicted RBP14.58□□□□□ -0.08
ERCC3-206ENST00000462306 FOLH1BQ9HBA9 442 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 ACSS1Q9NUB1 689 aaPredicted RBP14.58□□□□□ -0.08
ERCC3-206ENST00000462306 TAS2R9Q9NYW1 312 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 NOP53Q9NZM5 478 aaKnown RBP14.58□□□□□ -0.08
ERCC3-206ENST00000462306 CNIH4Q9P003 139 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 CNOT11Q9UKZ1 510 aaKnown RBP14.58□□□□□ -0.08
ERCC3-206ENST00000462306 NPIPA1Q9UND3 350 aa14.58□□□□□ -0.08
ERCC3-206ENST00000462306 USP9XQ93008 2570 aaPredicted RBP14.58□□□□□ -0.08
ERCC3-206ENST00000462306 HIVEP3Q5T1R4 2406 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 EML6Q6ZMW3 1958 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 CAPN14A8MX76 684 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 SDHDO14521 159 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 HDAC3O15379 428 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 ASNA1O43681 348 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 SEMA7AO75326 666 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 ERN1O75460 977 aaKnown RBP14.57□□□□□ -0.08
ERCC3-206ENST00000462306 PPM1BO75688 479 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 GLSO94925 669 aaPredicted RBP14.57□□□□□ -0.08
ERCC3-206ENST00000462306 ABCB1P08183 1280 aaPredicted RBP14.57□□□□□ -0.08
ERCC3-206ENST00000462306 PRPS1L1P21108 318 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 RPL3P39023 403 aaKnown RBP14.57□□□□□ -0.08
ERCC3-206ENST00000462306 TMED10P49755 219 aaKnown RBP14.57□□□□□ -0.08
ERCC3-206ENST00000462306 DIO3P55073 304 aa14.57□□□□□ -0.08
ERCC3-206ENST00000462306 CLDN8P56748 225 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms