RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SOX8P57073 446 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 RELQ04864 619 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 TUBB3Q13509 450 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 TSTA3Q13630 321 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 KCNAB1Q14722 419 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 ZNF169Q14929 603 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 KCNJ8Q15842 424 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 FAM83EQ2M2I3 478 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 DPY19L1Q2PZI1 675 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 CCSMST1Q4G0I0 132 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 DNAL1Q4LDG9 190 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 METTL11BQ5VVY1 283 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 ZNF324BQ6AW86 544 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 PGM2L1Q6PCE3 622 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 UGT2A3Q6UWM9 527 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 RNF111Q6ZNA4 994 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 LINC00299Q6ZSB3 139 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 FAM92BQ6ZTR7 304 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 TMEM200AQ86VY9 491 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 TMEM126BQ8IUX1 230 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 SYTL1Q8IYJ3 562 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 SPATA6LQ8N4H0 392 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 C2orf73Q8N5S3 287 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 SLC38A9Q8NBW4 561 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 CLEC1AQ8NC01 280 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 ACBD4Q8NC06 268 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 FBXO15Q8NCQ5 510 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 CATSPER1Q8NEC5 780 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 OR9A1PQ8NGU1 263 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 OR2L8Q8NGY9 312 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 RAB3IL1Q8TBN0 382 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 ADAMTS18Q8TE60 1221 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 PPP4R1Q8TF05 950 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 SGK3Q96BR1 496 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 INTS12Q96CB8 462 aaKnown RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 C18orf12Q96KH6 178 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 FER1L6-AS2Q96M78 137 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 IL17FQ96PD4 163 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 RBM14Q96PK6 669 aaKnown RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 TREX2Q9BQ50 279 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 GON7Q9BXV9 100 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 DERL2Q9GZP9 239 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 RAB33BQ9H082 229 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 ZNF696Q9H7X3 374 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 MANSC1Q9H8J5 431 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 SP140LQ9H930 580 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 FANCEQ9HB96 536 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 OXSMQ9NWU1 459 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 OR6C2Q9NZP2 312 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 PDE10AQ9Y233 779 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 TLN2Q9Y4G6 2542 aa5.63□□□□□ -1.51
SMARCC1-204ENST00000462198 HCFC1P51610 2035 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 KRT87PA6NCN2 255 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 CCDC160A6NGH7 325 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 ZSCAN5BA6NJL1 495 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 PEX12O00623 359 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 ACOX3O15254 700 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 MAGEB3O15480 346 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 SPAG7O75391 227 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 SCRG1O75711 98 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 CIB2O75838 187 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 WISP3O95389 354 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 SLC16A8O95907 504 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 TFAP2AP05549 437 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 HEXAP06865 529 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 CAPN1P07384 714 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 UGT2B7P16662 529 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 ZNF3P17036 446 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 TFEBP19484 476 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 PCSK6P29122 969 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 SLC26A3P40879 764 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 MAGEA12P43365 314 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 TDGF1P3P51864 188 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 AP2S1P53680 142 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 PNLIPRP1P54315 467 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 AP1S2P56377 157 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 PPP1CAP62136 330 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 YBX1P67809 324 aaKnown RBP5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 PHC1P78364 1004 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 IRF9Q00978 393 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 ACY1Q03154 408 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 FOLH1Q04609 750 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 GRB7Q14451 532 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 ARHGAP19Q14CB8 494 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 TSNQ15631 228 aaKnown RBP5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 NPTX1Q15818 432 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 AGAP7PQ5VUJ5 663 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 B3GNTL1Q67FW5 361 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 RPUSD3Q6P087 351 aaKnown RBP5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 SBSNQ6UWP8 590 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 IZUMO2Q6UXV1 221 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 TIFABQ6ZNK6 161 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 PRSS42Q7Z5A4 293 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 ISCA2Q86U28 154 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 GPSM1Q86YR5 675 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 RAB43Q86YS6 212 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 ULK2Q8IYT8 1036 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 ADGRF3Q8IZF5 1079 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 CENPSQ8N2Z9 138 aa5.62□□□□□ -1.51
SMARCC1-204ENST00000462198 MARVELD2Q8N4S9 558 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms