RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 A0A0G2JNJ9 132 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 GNG14A0A1W2PPG7 69 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 SERTM1A2A2V5 107 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 FOXO6A8MYZ6 492 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 ACOX3O15254 700 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 GLRA3O75311 464 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 PPM1BO75688 479 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 MYL2P10916 166 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 GABRA1P14867 456 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 PCSK2P16519 638 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 TRPC1P48995 793 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 NNATQ16517 81 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 GALNT18Q6P9A2 607 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 CCDC116Q8IYX3 515 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 CCNYL1Q8N7R7 359 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 OR52R1Q8NGF1 315 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 ZNF675Q8TD23 568 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 C16orf78Q8WTQ4 265 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 TRIM44Q96DX7 344 aaPredicted RBP17.35■□□□□ 0.37
VARS-220ENST00000461874 HSPBAP1Q96EW2 488 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 GNRHR2Q96P88 292 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 UBQLN3Q9H347 655 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 MID1IP1Q9NPA3 183 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 PRODH2Q9UF12 536 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 Q9UFV3 132 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 OTOGQ6ZRI0 2925 aa17.35■□□□□ 0.37
VARS-220ENST00000461874 UBFD1O14562 309 aaKnown RBP17.34■□□□□ 0.37
VARS-220ENST00000461874 TRAPPC6AO75865 159 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 PROCP04070 461 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 SHBGP04278 402 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 HPNP05981 417 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 DRD5P21918 477 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 MSX1P28360 303 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 TIA1P31483 386 aaKnown RBP eCLIP17.34■□□□□ 0.37
VARS-220ENST00000461874 ADH7P40394 386 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 PPICP45877 212 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 ZFP36L2P47974 494 aaKnown RBP17.34■□□□□ 0.37
VARS-220ENST00000461874 MASP1P48740 699 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 EMDP50402 254 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 CDK9P50750 372 aaKnown RBP17.34■□□□□ 0.37
VARS-220ENST00000461874 FOXA1P55317 472 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 DCAF7P61962 342 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 MRPS35P82673 323 aaKnown RBP17.34■□□□□ 0.37
VARS-220ENST00000461874 HEPACAMQ14CZ8 416 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 ZNF628Q5EBL2 1059 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 TMEM81Q6P7N7 255 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 SCIMPQ6UWF3 145 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 NUP54Q7Z3B4 507 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 ULK2Q8IYT8 1036 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 SAMD14Q8IZD0 417 aaPredicted RBP17.34■□□□□ 0.37
VARS-220ENST00000461874 HGDQ93099 445 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 OMA1Q96E52 524 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 TMEM41AQ96HV5 264 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 PFDN4Q9NQP4 134 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 SIRT5Q9NXA8 310 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 C15orf41Q9Y2V0 281 aa17.34■□□□□ 0.37
VARS-220ENST00000461874 C15orf38-AP3S2A0A0A6YYH1 394 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 FAM47E-STBD1D6RA91 191 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 TO15178 435 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 CDH16O75309 829 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 BCAS2O75934 225 aaPredicted RBP17.33■□□□□ 0.36
VARS-220ENST00000461874 ELAVL4P26378 380 aaKnown RBP17.33■□□□□ 0.36
VARS-220ENST00000461874 SLCO1A2P46721 670 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 KRTAP10-9P60411 292 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 NAA20P61599 178 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 BTKQ06187 659 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 PLCXD2Q0VAA5 305 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 TIGD3Q6B0B8 471 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 DESI1Q6ICB0 168 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 TDRPQ86YL5 185 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 UBLCP1Q8WVY7 318 aaPredicted RBP17.33■□□□□ 0.36
VARS-220ENST00000461874 EXOSC8Q96B26 276 aaKnown RBP17.33■□□□□ 0.36
VARS-220ENST00000461874 ERP27Q96DN0 273 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 EBPLQ9BY08 206 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 METTL7AQ9H8H3 244 aa17.33■□□□□ 0.36
VARS-220ENST00000461874 GPR55Q9Y2T6 319 aaPredicted RBP17.33■□□□□ 0.36
VARS-220ENST00000461874 NCKAP5O14513 1909 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 PLIN3O60664 434 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 ANXA4P09525 319 aaPredicted RBP17.32■□□□□ 0.36
VARS-220ENST00000461874 CRHR1P34998 444 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 GSTM5P46439 218 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 CCT5P48643 541 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 NAGLUP54802 743 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 DNAJB13P59910 316 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 TLE4Q04727 773 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 CRYZQ08257 329 aaKnown RBP17.32■□□□□ 0.36
VARS-220ENST00000461874 CEBPEQ15744 281 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 CCDC153Q494R4 210 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 RIPPLY2Q5TAB7 128 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 SLC30A6Q6NXT4 461 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 LIX1LQ8IVB5 337 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 DMRTC2Q8IXT2 367 aaPredicted RBP17.32■□□□□ 0.36
VARS-220ENST00000461874 OR9A2Q8NGT5 310 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 KAT2AQ92830 837 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 NODALQ96S42 347 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 TIMP4Q99727 224 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 ANKRA2Q9H9E1 313 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 PPCSQ9HAB8 311 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 MCCC2Q9HCC0 563 aa17.32■□□□□ 0.36
VARS-220ENST00000461874 SLC35C2Q9NQQ7 365 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms