RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 TRPC4APQ8TEL6 797 aa13.23□□□□□ -0.29
DNMT3A-207ENST00000461228 NUDT8Q8WV74 236 aa13.23□□□□□ -0.29
DNMT3A-207ENST00000461228 TUBA1CQ9BQE3 449 aa13.23□□□□□ -0.29
DNMT3A-207ENST00000461228 BDH2Q9BUT1 245 aa13.23□□□□□ -0.29
DNMT3A-207ENST00000461228 GSX2Q9BZM3 304 aa13.23□□□□□ -0.29
DNMT3A-207ENST00000461228 SHCBP1LQ9BZQ2 653 aa13.23□□□□□ -0.29
DNMT3A-207ENST00000461228 ZNF226Q9NYT6 803 aa13.23□□□□□ -0.29
DNMT3A-207ENST00000461228 ZNF639Q9UID6 485 aa13.23□□□□□ -0.29
DNMT3A-207ENST00000461228 PRAMEF25A6NGN4 478 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 FRG2CA6NGY1 282 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 OR6C70A6NIJ9 312 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 CXorf49A8MYA2 514 aaPredicted RBP13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 UBXN8O00124 270 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 CTIFO43310 598 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 SMPD2O60906 423 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 GUCY1B2O75343 617 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 ACSL3O95573 720 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 CT62P0C5K7 136 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 ZNF708P17019 499 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 S1PR1P21453 382 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 CRYGSP22914 178 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 STX2P32856 288 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 SOX18P35713 384 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 SLCO1A2P46721 670 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 LHX2P50458 406 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 PLCXD2Q0VAA5 305 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 MAP4K2Q12851 820 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 PRICKLE4Q2TBC4 344 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 CENPLQ8N0S6 344 aaPredicted RBP13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 OR4K14Q8NGD5 310 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 EXT2Q93063 718 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 SLC35A4Q96G79 324 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 BTBD9Q96Q07 612 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 SMR3AQ99954 134 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 NXF5Q9H1B4 397 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 CHD3Q12873 2000 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-207ENST00000461228 A0A087X1B8 175 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 A0A1W2PNV4 684 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 C1orf226A1L170 272 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 DEFB108AA8MXU0 73 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 CASKO14936 926 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 PORP16435 677 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 SSTR1P30872 391 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 CCKARP32238 428 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 CLDN18P56856 261 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 FOXF2Q12947 444 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 DLG1Q12959 904 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 CALCOCO2Q13137 446 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 SLMAPQ14BN4 828 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 ACAP2Q15057 778 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 FAM83EQ2M2I3 478 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 SLC48A1Q6P1K1 146 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 P3H2Q8IVL5 708 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 TEX9Q8N6V9 391 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 ZNF675Q8TD23 568 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 IGFBPL1Q8WX77 278 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 LCORQ96JN0 433 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 MARK4Q96L34 752 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 EPB41L4BQ9H329 900 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 ZNF395Q9H8N7 513 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 MAT2BQ9NZL9 334 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 PRODH2Q9UF12 536 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 TMCO1Q9UM00 188 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 DTX4Q9Y2E6 619 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 ANGPTL3Q9Y5C1 460 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 WIF1Q9Y5W5 379 aa13.21□□□□□ -0.29
DNMT3A-207ENST00000461228 SONP18583 2426 aaKnown RBP13.21□□□□□ -0.3
DNMT3A-207ENST00000461228 FBN1P35555 2871 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 GLOD5A6NK44 160 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 LINC01387J3KSC0 135 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 ICOSLGO75144 302 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 DRD5P21918 477 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 DEKP35659 375 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 PPICP45877 212 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 GANABQ14697 944 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 FRG2Q64ET8 278 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 RAPH1Q70E73 1250 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 MILR1Q7Z6M3 343 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 CMC1Q7Z7K0 106 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 LUZP2Q86TE4 346 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 PRIMA1Q86XR5 153 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 MYLK4Q86YV6 388 aaPredicted RBP13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 PLCZ1Q86YW0 608 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 KLHL7Q8IXQ5 586 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 WDSUB1Q8N9V3 476 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 OMA1Q96E52 524 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 FRG2BQ96QU4 278 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 NTMT1Q9BV86 223 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 ITPAQ9BY32 194 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 ELOVL5Q9NYP7 299 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 AHSPQ9NZD4 102 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 KLRF1Q9NZS2 232 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 ROS1P08922 2347 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 ANK2Q01484 3957 aa13.2□□□□□ -0.3
DNMT3A-207ENST00000461228 HEATR5AQ86XA9 2040 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 PLOD2O00469 737 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 GNB5O14775 395 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 SIAH2O43255 324 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms