RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CKMT1AP12532 417 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 CD6P30203 668 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 LIPAP38571 399 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 SLC35A2P78381 396 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 TOR1AIP1Q5JTV8 583 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 TMEM107Q6UX40 140 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 UNC5DQ6UXZ4 953 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF767PQ75MW2 155 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF761Q86XN6 746 aaPredicted RBP14.57□□□□□ -0.08
LMNB1-203ENST00000460265 ETFBKMTQ8IXQ9 262 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 ANKRD53Q8N9V6 530 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 OR5K2Q8NHB8 316 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 SLC38A5Q8WUX1 472 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 POP5Q969H6 163 aaKnown RBP14.57□□□□□ -0.08
LMNB1-203ENST00000460265 COQ8BQ96D53 544 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 SLC30A2Q9BRI3 323 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 SGPP1Q9BX95 441 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF304Q9HCX3 659 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 PRUNE2Q8WUY3 3088 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 RNGTTO60942 597 aaKnown RBP14.57□□□□□ -0.08
LMNB1-203ENST00000460265 HOXB3P14651 431 aaPredicted RBP14.57□□□□□ -0.08
LMNB1-203ENST00000460265 UGT2B15P54855 530 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 HOXC5Q00444 222 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 FADDQ13158 208 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF776Q68DI1 518 aaPredicted RBP14.57□□□□□ -0.08
LMNB1-203ENST00000460265 FAM71E1Q6IPT2 247 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 LSRQ86X29 649 aaPredicted RBP14.57□□□□□ -0.08
LMNB1-203ENST00000460265 KIAA1958Q8N8K9 716 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 GALNT11Q8NCW6 608 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 RAB7BQ96AH8 199 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 VOPP1Q96AW1 172 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 PIP5K1AQ99755 562 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 OR51I1Q9H343 314 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 SRMSQ9H3Y6 488 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 KLHL31Q9H511 634 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 CLDND1Q9NY35 253 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 C17orf113A0A1B0GUU1 675 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 FOXE1O00358 373 aaPredicted RBP14.56□□□□□ -0.08
LMNB1-203ENST00000460265 BTN3A3O00478 584 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 TMPRSS11DO60235 418 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 CH25HO95992 272 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 PRPH2P23942 346 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 PIK3CBP42338 1070 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 RAB28P51157 221 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 OLR1P78380 273 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 MVKQ03426 396 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 TYW3Q6IPR3 259 aaKnown RBP14.56□□□□□ -0.08
LMNB1-203ENST00000460265 KIAA1211LQ6NV74 962 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 PHC2Q8IXK0 858 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 KLHDC8AQ8IYD2 350 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 OR8H3Q8N146 312 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 FGF14Q92915 247 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 FAM83CQ9BQN1 747 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 MYNNQ9NPC7 610 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF780BQ9Y6R6 833 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 SLC16A6O15403 523 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 KLF8O95600 359 aaPredicted RBP14.56□□□□□ -0.08
LMNB1-203ENST00000460265 ASGR2P07307 311 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 IGFBP1P08833 259 aaPredicted RBP14.56□□□□□ -0.08
LMNB1-203ENST00000460265 HOXB6P17509 224 aaKnown RBP14.56□□□□□ -0.08
LMNB1-203ENST00000460265 DDCP20711 480 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 CNR2P34972 360 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 OPRD1P41143 372 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 IL18R1Q13478 541 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 SHHQ15465 462 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 LCTLQ6UWM7 567 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 IQCF1Q8N6M8 205 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 YIPF7Q8N8F6 280 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 OR52E1Q8NGJ3 308 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 HDHD5Q9BXW7 423 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 PCBD2Q9H0N5 130 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 EXO1Q9UQ84 846 aaKnown RBP14.56□□□□□ -0.08
LMNB1-203ENST00000460265 SLC9A8Q9Y2E8 581 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 POFUT2Q9Y2G5 429 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 SMIM30A4D0T7 59 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 SLITRK5O94991 958 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 LINC00271P0C7V0 271 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 PCSK2P16519 638 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 RYKP34925 604 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 CTAG1AP78358 180 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 MXD1Q05195 221 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 OR4C11Q6IEV9 310 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 PAMR1Q6UXH9 720 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 NLRP8Q86W28 1048 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 TMEFF1Q8IYR6 380 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 TCEANCQ8N8B7 351 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 LILRB1Q8NHL6 650 aaPredicted RBP14.56□□□□□ -0.08
LMNB1-203ENST00000460265 ZFAND1Q8TCF1 268 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 TM4SF18Q96CE8 201 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 RNF170Q96K19 258 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 DUSP21Q9H596 190 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 IL20RAQ9UHF4 553 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 MSRAQ9UJ68 235 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 ACSL5Q9ULC5 683 aa14.56□□□□□ -0.08
LMNB1-203ENST00000460265 RPLP0P05388 317 aaKnown RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 H1F0P07305 194 aaKnown RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 IGFBP4P22692 258 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 MYL9P24844 172 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 CERS1P27544 350 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 TAS2R41P59536 307 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms