RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 UGT2A3Q6UWM9 527 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ZNF793Q6ZN11 406 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 LDB1Q86U70 411 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ANKRD13BQ86YJ7 626 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 CA13Q8N1Q1 262 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 LSMEM1Q8N8F7 131 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SYT14Q8NB59 555 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ZNF740Q8NDX6 193 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ZCCHC10Q8TBK6 192 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SPPL2AQ8TCT8 520 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 UTP15Q8TED0 518 aaKnown RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SMAP2Q8WU79 429 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SLC13A3Q8WWT9 602 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 AKAP1Q92667 903 aaKnown RBP eCLIP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ABTB1Q969K4 478 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 DTNBP1Q96EV8 351 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 PDLIM2Q96JY6 352 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 PKP4Q99569 1192 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 TUBA1CQ9BQE3 449 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 FERMT1Q9BQL6 677 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 WDR12Q9GZL7 423 aaKnown RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 VPS11Q9H270 941 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 GP6Q9HCN6 339 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 KLHL28Q9NXS3 571 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ALKBH4Q9NXW9 302 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 NKIRAS2Q9NYR9 191 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 RABL2BQ9UNT1 228 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 RNF115Q9Y4L5 304 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 URADA6NGE7 173 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 OR6C76A6NM76 312 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 CAPN14A8MX76 684 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 TMCO5BA8MYB1 307 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 UBFD1O14562 309 aaKnown RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 GSTA4O15217 222 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SHOXO15266 292 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 CEP104O60308 925 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 OR1I1O60431 355 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 CTNSO60931 367 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 TMEM127O75204 238 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 MYO1DO94832 1006 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 POU2F1P14859 743 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 NAGAP17050 411 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 PCMT1P22061 227 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 LSP1P33241 339 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 GALNSP34059 522 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 GCKP35557 465 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 PIGAP37287 484 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SLC1A1P43005 524 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 TTPAP49638 278 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 CLNS1AP54105 237 aaKnown RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 WNT3P56703 355 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 RAB38P57729 211 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 KCNJ2P63252 427 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 RGS1Q08116 209 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SP140Q13342 867 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ZNF672Q499Z4 452 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 AWAT1Q58HT5 328 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 DCST1Q5T197 706 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 HECTD2Q5U5R9 776 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 HLA-DQA1Q5Y7H0 255 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 TIGD3Q6B0B8 471 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 CAPN13Q6MZZ7 669 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 CASC4Q6P4E1 433 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 CLEC2AQ6UVW9 174 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ENPP6Q6UWR7 440 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 NPNTQ6UXI9 565 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 BBS12Q6ZW61 710 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 BTN2A1Q7KYR7 527 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 LUZP2Q86TE4 346 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 RNF10Q8N5U6 811 aaKnown RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 TEX29Q8N6K0 151 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 GBP7Q8N8V2 638 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 OR5T3Q8NGG3 340 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 OR13J1Q8NGT2 312 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 GABPB2Q8TAK5 448 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SLC35G2Q8TBE7 412 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 PTPMT1Q8WUK0 201 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 RNF138Q8WVD3 245 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SLC44A1Q8WWI5 657 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 IPCEF1Q8WWN9 437 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ANKRD7Q92527 254 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 FBXW5Q969U6 566 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 UBXN10Q96LJ8 280 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 ADAD1Q96M93 576 aaKnown RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 HS6ST2Q96MM7 605 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 MAK16Q9BXY0 300 aaKnown RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SLITRK2Q9H156 845 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 LRRC40Q9H9A6 602 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 MYOZ1Q9NP98 299 aaPredicted RBP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 FANCFQ9NPI8 374 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 PRTFDC1Q9NRG1 225 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 PLSCR4Q9NRQ2 329 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.9□□□□□ -2.11
NEDD1-204ENST00000457368 LIPT1Q9Y234 373 aa1.9□□□□□ -2.11
NEDD1-204ENST00000457368 PRKDCP78527 4128 aaKnown RBP1.89□□□□□ -2.11
NEDD1-204ENST00000457368 ERI2A8K979 691 aaKnown RBP1.89□□□□□ -2.11
NEDD1-204ENST00000457368 G3V3Y1 287 aa1.89□□□□□ -2.11
NEDD1-204ENST00000457368 H7BY64 318 aa1.89□□□□□ -2.11
NEDD1-204ENST00000457368 TRIM77I1YAP6 450 aa1.89□□□□□ -2.11
NEDD1-204ENST00000457368 PSMD12O00232 456 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms