RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ZNF764Q96H86 408 aaPredicted RBP21.34■■□□□ 1.01
CBX3-204ENST00000456948 FCRL1Q96LA6 429 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 TTTY12Q9BZ98 90 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 ARGLU1Q9NWB6 273 aaPredicted RBP21.34■■□□□ 1.01
CBX3-204ENST00000456948 NKIRAS1Q9NYS0 192 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 SH3BP4Q9P0V3 963 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 RAP2CQ9Y3L5 183 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 SPTBN1Q01082 2364 aaKnown RBP21.33■■□□□ 1.01
CBX3-204ENST00000456948 WIPF3A6NGB9 483 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 G3V3Y1 287 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 CCL21O00585 134 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 PEX11AO75192 247 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 SNX4O95219 450 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 LDLRP01130 860 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 JUNP05412 331 aaKnown RBP21.33■■□□□ 1.01
CBX3-204ENST00000456948 DHRS4L1P0CG22 281 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 ABCD3P28288 659 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 PTGS2P35354 604 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 HPCAL1P37235 193 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 SLC1A6P48664 564 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 DNASE1L1P49184 302 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 EMDP50402 254 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 SLC18A1P54219 525 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 GTF3C1Q12789 2109 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 TMEM198Q66K66 360 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 NUP54Q7Z3B4 507 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 PACS2Q86VP3 889 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 FAM109AQ8N4B1 249 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 ANKRD42Q8N9B4 389 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 TUBGCP3Q96CW5 907 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 TSSK3Q96PN8 268 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 PRPF18Q99633 342 aaKnown RBP21.33■■□□□ 1.01
CBX3-204ENST00000456948 DOHHQ9BU89 302 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 ITPAQ9BY32 194 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 NXF5Q9H1B4 397 aaKnown RBP21.33■■□□□ 1.01
CBX3-204ENST00000456948 SH2D2AQ9NP31 389 aa21.33■■□□□ 1.01
CBX3-204ENST00000456948 EIF3LQ9Y262 564 aaKnown RBP21.33■■□□□ 1.01
CBX3-204ENST00000456948 CHCHD2Q9Y6H1 151 aaPredicted RBP21.33■■□□□ 1.01
CBX3-204ENST00000456948 MYO7BQ6PIF6 2116 aa21.32■■□□□ 1
CBX3-204ENST00000456948 FRG2CA6NGY1 282 aa21.32■■□□□ 1
CBX3-204ENST00000456948 TBX19O60806 448 aa21.32■■□□□ 1
CBX3-204ENST00000456948 LYPLA1O75608 230 aaPredicted RBP21.32■■□□□ 1
CBX3-204ENST00000456948 PPM1BO75688 479 aa21.32■■□□□ 1
CBX3-204ENST00000456948 PRPS2P11908 318 aa21.32■■□□□ 1
CBX3-204ENST00000456948 SDC1P18827 310 aa21.32■■□□□ 1
CBX3-204ENST00000456948 TACR1P25103 407 aa21.32■■□□□ 1
CBX3-204ENST00000456948 PTGER1P34995 402 aa21.32■■□□□ 1
CBX3-204ENST00000456948 GPC1P35052 558 aa21.32■■□□□ 1
CBX3-204ENST00000456948 PIGAP37287 484 aa21.32■■□□□ 1
CBX3-204ENST00000456948 RPL14P50914 215 aaKnown RBP21.32■■□□□ 1
CBX3-204ENST00000456948 PLCXD2Q0VAA5 305 aa21.32■■□□□ 1
CBX3-204ENST00000456948 SLC10A1Q14973 349 aa21.32■■□□□ 1
CBX3-204ENST00000456948 HYAL4Q2M3T9 481 aa21.32■■□□□ 1
CBX3-204ENST00000456948 TRIM42Q8IWZ5 723 aa21.32■■□□□ 1
CBX3-204ENST00000456948 FNDC5Q8NAU1 212 aa21.32■■□□□ 1
CBX3-204ENST00000456948 GFM2Q969S9 779 aaKnown RBP21.32■■□□□ 1
CBX3-204ENST00000456948 ZBED6CLQ96FA7 236 aaPredicted RBP21.32■■□□□ 1
CBX3-204ENST00000456948 EGLN2Q96KS0 407 aa21.32■■□□□ 1
CBX3-204ENST00000456948 DEFB127Q9H1M4 99 aa21.32■■□□□ 1
CBX3-204ENST00000456948 ZFP64Q9NPA5 681 aa21.32■■□□□ 1
CBX3-204ENST00000456948 DDX18Q9NVP1 670 aaKnown RBP21.32■■□□□ 1
CBX3-204ENST00000456948 ZNF835Q9Y2P0 537 aa21.32■■□□□ 1
CBX3-204ENST00000456948 GPR55Q9Y2T6 319 aaPredicted RBP21.32■■□□□ 1
CBX3-204ENST00000456948 TMEM120BA0PK00 339 aa21.31■■□□□ 1
CBX3-204ENST00000456948 FAM166BA8MTA8 275 aa21.31■■□□□ 1
CBX3-204ENST00000456948 PLOD2O00469 737 aa21.31■■□□□ 1
CBX3-204ENST00000456948 PDPK1O15530 556 aa21.31■■□□□ 1
CBX3-204ENST00000456948 AKAP10O43572 662 aa21.31■■□□□ 1
CBX3-204ENST00000456948 ABCB7O75027 752 aa21.31■■□□□ 1
CBX3-204ENST00000456948 SKAP2O75563 359 aaPredicted RBP21.31■■□□□ 1
CBX3-204ENST00000456948 GLSO94925 669 aaPredicted RBP21.31■■□□□ 1
CBX3-204ENST00000456948 BCKDHAP12694 445 aa21.31■■□□□ 1
CBX3-204ENST00000456948 FBXW4P57775 412 aa21.31■■□□□ 1
CBX3-204ENST00000456948 MRPS22P82650 360 aaKnown RBP21.31■■□□□ 1
CBX3-204ENST00000456948 CASP8Q14790 479 aa21.31■■□□□ 1
CBX3-204ENST00000456948 ZNHIT3Q15649 155 aaPredicted RBP21.31■■□□□ 1
CBX3-204ENST00000456948 CMPK2Q5EBM0 449 aa21.31■■□□□ 1
CBX3-204ENST00000456948 XKR7Q5GH72 579 aa21.31■■□□□ 1
CBX3-204ENST00000456948 PRAMEF20Q5VT98 475 aa21.31■■□□□ 1
CBX3-204ENST00000456948 TMEM64Q6YI46 380 aa21.31■■□□□ 1
CBX3-204ENST00000456948 Q6ZPB1 254 aaPredicted RBP21.31■■□□□ 1
CBX3-204ENST00000456948 SLC34A3Q8N130 599 aa21.31■■□□□ 1
CBX3-204ENST00000456948 NATD1Q8N6N6 113 aa21.31■■□□□ 1
CBX3-204ENST00000456948 SPPL2AQ8TCT8 520 aa21.31■■□□□ 1
CBX3-204ENST00000456948 ZBTB9Q96C00 473 aa21.31■■□□□ 1
CBX3-204ENST00000456948 TMCO6Q96DC7 493 aa21.31■■□□□ 1
CBX3-204ENST00000456948 JSRP1Q96MG2 331 aaPredicted RBP21.31■■□□□ 1
CBX3-204ENST00000456948 AMDHD1Q96NU7 426 aa21.31■■□□□ 1
CBX3-204ENST00000456948 GLIPR2Q9H4G4 154 aa21.31■■□□□ 1
CBX3-204ENST00000456948 LDAHQ9H6V9 325 aa21.31■■□□□ 1
CBX3-204ENST00000456948 TMBIM4Q9HC24 238 aa21.31■■□□□ 1
CBX3-204ENST00000456948 TUBA8Q9NY65 449 aaPredicted RBP21.31■■□□□ 1
CBX3-204ENST00000456948 BAIAP2L1Q9UHR4 511 aa21.31■■□□□ 1
CBX3-204ENST00000456948 SH3BGRL2Q9UJC5 107 aa21.31■■□□□ 1
CBX3-204ENST00000456948 MAPRE3Q9UPY8 281 aa21.31■■□□□ 1
CBX3-204ENST00000456948 OR10H1Q9Y4A9 318 aa21.31■■□□□ 1
CBX3-204ENST00000456948 EML6Q6ZMW3 1958 aa21.3■■□□□ 1
CBX3-204ENST00000456948 ATP6AP2A0A1C7CYW4 349 aa21.3■■□□□ 1
CBX3-204ENST00000456948 PINLYPA6NC86 204 aa21.3■■□□□ 1
CBX3-204ENST00000456948 TO15178 435 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms