RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 HOXB13Q92826 284 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-205ENST00000454542 KAT2AQ92830 837 aa13.06□□□□□ -0.32
HDAC4-205ENST00000454542 CIDECQ96AQ7 238 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-205ENST00000454542 PPCDCQ96CD2 204 aa13.06□□□□□ -0.32
HDAC4-205ENST00000454542 HSPBAP1Q96EW2 488 aa13.06□□□□□ -0.32
HDAC4-205ENST00000454542 LCORQ96JN0 433 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-205ENST00000454542 MAELQ96JY0 434 aaKnown RBP13.06□□□□□ -0.32
HDAC4-205ENST00000454542 NUF2Q9BZD4 464 aa13.06□□□□□ -0.32
HDAC4-205ENST00000454542 CLMPQ9H6B4 373 aa13.06□□□□□ -0.32
HDAC4-205ENST00000454542 ANKRA2Q9H9E1 313 aa13.06□□□□□ -0.32
HDAC4-205ENST00000454542 ZNF446Q9NWS9 450 aa13.06□□□□□ -0.32
HDAC4-205ENST00000454542 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
HDAC4-205ENST00000454542 NTMQ9P121 344 aa13.06□□□□□ -0.32
HDAC4-205ENST00000454542 C19orf53Q9UNZ5 99 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-205ENST00000454542 GPR55Q9Y2T6 319 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-205ENST00000454542 POLEQ07864 2286 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 PINLYPA6NC86 204 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 ANKUB1A6NFN9 424 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 ANKRD28O15084 1053 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 HDAC3O15379 428 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 AKAP10O43572 662 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 PEX1O43933 1283 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 NAGAP17050 411 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 ABCD3P28288 659 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 PPICP45877 212 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
HDAC4-205ENST00000454542 PSPHP78330 225 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 KCNC4Q03721 635 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 SRSF1Q07955 248 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC4-205ENST00000454542 RNFT1Q5M7Z0 435 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 HLA-DQA1Q5Y7H0 255 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 TMEM81Q6P7N7 255 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 TMEM107Q6UX40 140 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 MAVSQ7Z434 540 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 OR2M7Q8NG81 312 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 OR10G3Q8NGC4 313 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 ZNF75CPQ92670 426 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-205ENST00000454542 ELP4Q96EB1 424 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 ZBED6CLQ96FA7 236 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-205ENST00000454542 C7orf26Q96N11 449 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 GPR137Q96N19 417 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 SECISBP2Q96T21 854 aaKnown RBP13.05□□□□□ -0.32
HDAC4-205ENST00000454542 FOLH1BQ9HBA9 442 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 PROK2Q9HC23 129 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 SACM1LQ9NTJ5 587 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 BCAP29Q9UHQ4 241 aa13.05□□□□□ -0.32
HDAC4-205ENST00000454542 CNOT11Q9UKZ1 510 aaKnown RBP13.05□□□□□ -0.32
HDAC4-205ENST00000454542 EIF3LQ9Y262 564 aaKnown RBP13.05□□□□□ -0.32
HDAC4-205ENST00000454542 FLNCQ14315 2725 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 EML6Q6ZMW3 1958 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 SLCO1B7G3V0H7 640 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 KLRC4-KLRK1H3BQV0 150 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 UPK1AO00322 258 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 ZNF195O14628 629 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 GLSO94925 669 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-205ENST00000454542 ALDOCP09972 364 aaKnown RBP13.04□□□□□ -0.32
HDAC4-205ENST00000454542 CT45A8P0DMV1 189 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 CT45A9P0DMV2 189 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 G6PDP11413 515 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 ZNF24P17028 368 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 DDX5P17844 614 aaKnown RBP13.04□□□□□ -0.32
HDAC4-205ENST00000454542 DRD5P21918 477 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 DIO3P55073 304 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 CLDN8P56748 225 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 NRG3P56975 720 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 GPR85P60893 370 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 FOXO1Q12778 655 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 HYAL4Q2M3T9 481 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 CT45A2Q5DJT8 189 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 EXOSC6Q5RKV6 272 aaKnown RBP13.04□□□□□ -0.32
HDAC4-205ENST00000454542 BNC2Q6ZN30 1099 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-205ENST00000454542 ZNF551Q7Z340 670 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-205ENST00000454542 GOLGA6L1Q8N7Z2 621 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 ZFP28Q8NHY6 868 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 PSMA8Q8TAA3 256 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 RNF138Q8WVD3 245 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 COQ8BQ96D53 544 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 PPP1R36Q96LQ0 422 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 PLSCR2Q9NRY7 297 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 SIRT3Q9NTG7 399 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-205ENST00000454542 TAS2R9Q9NYW1 312 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 NPFFR2Q9Y5X5 522 aa13.04□□□□□ -0.32
HDAC4-205ENST00000454542 HIVEP3Q5T1R4 2406 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 ANKRD33BA6NCL7 494 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 CAPN14A8MX76 684 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 ERN1O75460 977 aaKnown RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 PPM1BO75688 479 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 WISP2O76076 250 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 LBPP18428 481 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 PRPS1L1P21108 318 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 CNR1P21554 472 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 MAP3K8P41279 467 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 PSG6Q00889 435 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 ALDH6A1Q02252 535 aaKnown RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 HSPB3Q12988 150 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 NNATQ16517 81 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 TMEM64Q6YI46 380 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms