RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 GSTT2BP0CG30 244 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 CEBPBP17676 345 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 XRCC1P18887 633 aaPredicted RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 OPRL1P41146 370 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 NAPAP54920 295 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 DLX5P56178 289 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 HYAL1Q12794 435 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 ZMYND11Q15326 602 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 SGSM1Q2NKQ1 1148 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 TTC23Q5W5X9 447 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 SEL1L3Q68CR1 1132 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 PMF1Q6P1K2 205 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 PNCKQ6P2M8 343 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 BLOC1S2Q6QNY1 142 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 ATRAIDQ6UW56 229 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 GDPD4Q6W3E5 623 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 HACD2Q6Y1H2 254 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 SLC26A9Q7LBE3 791 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 VPS36Q86VN1 386 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 RANBP3LQ86VV4 465 aaPredicted RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 SLC22A9Q8IVM8 553 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 APLFQ8IW19 511 aaPredicted RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 OR5T2Q8NGG2 359 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 RAET1EQ8TD07 263 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 C11orf52Q96A22 123 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 ZBTB9Q96C00 473 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 CNRIP1Q96F85 164 aaPredicted RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 ALKBH3Q96Q83 286 aaPredicted RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 ZNF300Q96RE9 604 aaPredicted RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 APOOQ9BUR5 198 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 PITPNM3Q9BZ71 974 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 GCOM2Q9BZD3 368 aaPredicted RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 MMP28Q9H239 520 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 Q9HAA7 133 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 APMAPQ9HDC9 416 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 UBE2TQ9NPD8 197 aaPredicted RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 GHRLQ9UBU3 117 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 KLK11Q9UBX7 282 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 PURGQ9UJV8 347 aaKnown RBP3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 PYGO1Q9Y3Y4 419 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 C2CD2Q9Y426 696 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 OR10H1Q9Y4A9 318 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 FKBP7Q9Y680 259 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 AP4B1Q9Y6B7 739 aa3.55□□□□□ -1.84
HMGN3P1-201ENST00000453847 A0A087WW49 117 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 NEDD8-MDP1E9PL57 170 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 PDLIM1O00151 329 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 ARPC3O15145 178 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 DUX1O43812 170 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 PCDH7O60245 1069 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 RANBP6O60518 1105 aaKnown RBP3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 B4GALT2O60909 372 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 NXPH4O95158 308 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 CAVIN2O95810 425 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 IGSF6O95976 241 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 IGHEP01854 428 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 OPN1LWP04000 364 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 IGF1P05019 195 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 TOP1P11387 765 aaKnown RBP3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 CCKARP32238 428 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 BRCC3P46736 316 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 ABCE1P61221 599 aaKnown RBP3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 HAND2P61296 217 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 CUL2Q13617 745 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 ELAVL3Q14576 367 aaKnown RBP3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 FAM189A2Q15884 450 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 SYPL1Q16563 259 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 KNOP1Q1ED39 458 aaKnown RBP3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 GGTA1PQ4G0N0 100 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 UNC50Q53HI1 259 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 TAF3Q5VWG9 929 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 SYT10Q6XYQ8 523 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 TMEM184AQ6ZMB5 413 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 ADAMTSL5Q6ZMM2 481 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 CYS1Q717R9 158 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 P4HA3Q7Z4N8 544 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 VSTM4Q8IW00 320 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 LRRC43Q8N309 656 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 OR1K1Q8NGR3 316 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 OR6F1Q8NGZ6 308 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 C11orf45Q8TAV5 145 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 MAPK15Q8TD08 544 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 SCARB1Q8WTV0 552 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 FAM3CQ92520 227 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 PIGCQ92535 297 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 FBXO32Q969P5 355 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 MEIS3Q99687 375 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 TTYH2Q9BSA4 534 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 CAPS2Q9BXY5 557 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 TRIM9Q9C026 710 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 IL1RL2Q9HB29 575 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 ZNF334Q9HCZ1 680 aaPredicted RBP3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 ZNF446Q9NWS9 450 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 C1orf123Q9NWV4 160 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 UTP6Q9NYH9 597 aaKnown RBP3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 CRLS1Q9UJA2 301 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 RNF6Q9Y252 685 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 ATP10AO60312 1499 aa3.54□□□□□ -1.84
HMGN3P1-201ENST00000453847 AFF2P51816 1311 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms