RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ERVK-18Q9QC07 812 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 MAN2B2Q9Y2E5 1009 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 MAGED1Q9Y5V3 778 aaPredicted RBP14.94□□□□□ -0.02
SNX17-204ENST00000453453 USP34Q70CQ2 3546 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 A0A0G2JN53 185 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 A0A1W2PQM1 296 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 METTL15A6NJ78 407 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 A8MU76 341 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 DPM1O60762 260 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 CREG1O75629 220 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 LRATO95237 230 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 GBAP04062 536 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 ANKRD34CP0C6C1 535 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 COX7A2P14406 83 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 HIST1H1TP22492 207 aaPredicted RBP14.93□□□□□ -0.02
SNX17-204ENST00000453453 ARHGDIAP52565 204 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 C21orf58P58505 322 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 TAS2R50P59544 299 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 TEKQ02763 1124 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 SLC9A5Q14940 896 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 PGS1Q32NB8 556 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 ZNF404Q494X3 552 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 MSANTD1Q6ZTZ1 278 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 D2HGDHQ8N465 521 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 KRTCAP2Q8N6L1 136 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 TTC29Q8NA56 475 aaPredicted RBP14.93□□□□□ -0.02
SNX17-204ENST00000453453 KLHL6Q8WZ60 621 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 TESCQ96BS2 214 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 LGALS12Q96DT0 336 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 PYURFQ96I23 114 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 SLC41A2Q96JW4 573 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 CDC6Q99741 560 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 ZNF717Q9BY31 904 aaPredicted RBP14.93□□□□□ -0.02
SNX17-204ENST00000453453 AICDAQ9GZX7 198 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 TPK1Q9H3S4 243 aa14.93□□□□□ -0.02
SNX17-204ENST00000453453 LYARQ9NX58 379 aaKnown RBP14.93□□□□□ -0.02
SNX17-204ENST00000453453 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.93□□□□□ -0.02
SNX17-204ENST00000453453 C4orf47A7E2U8 309 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 CENPBD1B2RD01 187 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 PTGES3LE9PB15 166 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 E9PQ18 207 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 SNPHO15079 494 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 SH3BP5O60239 455 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 ALOX12P18054 663 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 ATP5A1P25705 553 aaKnown RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 S100A3P33764 101 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 TGFBR2P37173 567 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 ETV6P41212 452 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 BTN3A2P78410 334 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 SRSF11Q05519 484 aaKnown RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 C2orf80Q0P641 193 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 DNASE1L3Q13609 305 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 RAPSNQ13702 412 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 MAPKAPK3Q16644 382 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 LRIF1Q5T3J3 769 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 KDM4DQ6B0I6 523 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 USP43Q70EL4 1123 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 TSPYL5Q86VY4 417 aaPredicted RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 FAM86B1Q8N7N1 296 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 ACOT4Q8N9L9 421 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 OR8K5Q8NH50 307 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 MTERF3Q96E29 417 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 ZHX1-C8orf76Q96EF9 292 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 EGLN2Q96KS0 407 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 TEFMQ96QE5 360 aaKnown RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 SERINC2Q96SA4 455 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 FAIM2Q9BWQ8 316 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 LHX9Q9NQ69 397 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 PRDM7Q9NQW5 492 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 SACM1LQ9NTJ5 587 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 VAPAQ9P0L0 249 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 SAMD4AQ9UPU9 718 aaKnown RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 SLC22A7Q9Y694 548 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 A0A096LPI6 279 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 A0A0A6YYD5 115 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 FAM172BPA6NC97 362 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 AGAP5A6NIR3 686 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 D6RAR5 112 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 SCAMP2O15127 329 aaKnown RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 B3GALT2O43825 422 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 MT-ND2P03891 347 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 PSMB9P28065 219 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 GABRA4P48169 554 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 MASP1P48740 699 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 DEFA1P59665 94 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 DEFA3P59666 94 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 PIGFQ07326 219 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 ABHD18Q0P651 414 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 HEPACAMQ14CZ8 416 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 FAM174BQ3ZCQ3 159 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 MLIPQ5VWP3 458 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 CPZQ66K79 652 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 AMER2Q8N7J2 671 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 KBTBD8Q8NFY9 601 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 ZNF486Q96H40 463 aaPredicted RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 CCDC74BQ96LY2 380 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 CPPED1Q9BRF8 314 aaPredicted RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 THUMPD3Q9BV44 507 aaKnown RBP14.92□□□□□ -0.02
SNX17-204ENST00000453453 ITPAQ9BY32 194 aa14.92□□□□□ -0.02
SNX17-204ENST00000453453 OR2B2Q9GZK3 357 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms