RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 SLC29A4Q7RTT9 530 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 TRPM8Q7Z2W7 1104 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 C9orf40Q8IXQ3 194 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 LGI4Q8N135 537 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 GALNT16Q8N428 558 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 PCYOX1LQ8NBM8 494 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 SIMC1Q8NDZ2 872 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 NUP43Q8NFH3 380 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 OR5L2Q8NGL0 311 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 C16orf52Q8NHV5 167 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 DOK4Q8TEW6 326 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 APOBEC4Q8WW27 367 aaKnown RBP10.75□□□□□ -0.69
SCN9A-204ENST00000452182 PSMF1Q92530 271 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 GIMAP5Q96F15 307 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 MS4A4EQ96PG1 132 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 LHPPQ9H008 270 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 ANKRA2Q9H9E1 313 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 MAP10Q9P2G4 905 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 BCAP29Q9UHQ4 241 aa10.75□□□□□ -0.69
SCN9A-204ENST00000452182 HEMK1Q9Y5R4 338 aaPredicted RBP10.75□□□□□ -0.69
SCN9A-204ENST00000452182 TRBV5-3A0A0A0MS03 114 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 RNF103-CHMP3A0A140T963 221 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 MASP2O00187 686 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 CEACAM4O75871 244 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 SOX30O94993 753 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 ANP32DO95626 131 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 ITGB2P05107 769 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 CELA2AP08217 269 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 ITGAMP11215 1152 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 MAGEA8P43361 318 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 PSPHP78330 225 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 TXNL4AP83876 142 aaKnown RBP10.74□□□□□ -0.69
SCN9A-204ENST00000452182 GAB1Q13480 694 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 MMEL1Q495T6 779 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 SPDYE7PQ495Y7 208 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 EXOSC6Q5RKV6 272 aaKnown RBP10.74□□□□□ -0.69
SCN9A-204ENST00000452182 SAXO2Q658L1 398 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 REP15Q6BDI9 236 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 DLEU7Q6UYE1 221 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 KIF2BQ8N4N8 673 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 ZFP90Q8TF47 636 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 TP53INP1Q96A56 240 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 NEURL3Q96EH8 262 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 THOC3Q96J01 351 aaKnown RBP10.74□□□□□ -0.69
SCN9A-204ENST00000452182 VSTM2LQ96N03 204 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 SLC35A5Q9BS91 424 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 DEFB126Q9BYW3 111 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 WWTR1Q9GZV5 400 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 EPS8L2Q9H6S3 715 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 EFCAB1Q9HAE3 211 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 SLC6A13Q9NSD5 602 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 GPATCH2Q9NW75 528 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 GIN1Q9NXP7 522 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 SLAMF8Q9P0V8 285 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 PCDHB14Q9Y5E9 798 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 DOCK10Q96BY6 2186 aa10.74□□□□□ -0.69
SCN9A-204ENST00000452182 C2orf92A0A1B0GVN3 265 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 TMEM200CA6NKL6 621 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CDK2AP1O14519 115 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MRASO14807 208 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 HMGN2P05204 90 aaKnown RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 GSNP06396 782 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 KRT16P08779 473 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 DRD5P21918 477 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 ITGA3P26006 1051 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 SOAT1P35610 550 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MAP3K8P41279 467 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PPICP45877 212 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CXADRP78310 365 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 TP53BP2Q13625 1128 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 TRMT5Q32P41 509 aaKnown RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 IRAK1BP1Q5VVH5 260 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MFSD12Q6NUT3 480 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 BORAQ6PGQ7 559 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 C6orf120Q7Z4R8 191 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 DHDDSQ86SQ9 333 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 SLC5A8Q8N695 610 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 POU5F2Q8N7G0 328 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 AMER2Q8N7J2 671 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 ZNF441Q8N8Z8 693 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CDRT4Q8N9R6 151 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PRR7Q8TB68 274 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MIPOL1Q8TD10 442 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 ADIPOR1Q96A54 375 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 ROPN1LQ96C74 230 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MAGED4Q96JG8 741 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 BTBD9Q96Q07 612 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 LMF2Q9BU23 707 aaKnown RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 FOLH1BQ9HBA9 442 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 SLC25A37Q9NYZ2 338 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 VAPAQ9P0L0 249 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MYOTQ9UBF9 498 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 TAGLN3Q9UI15 199 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 TEKT2Q9UIF3 430 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 DTX4Q9Y2E6 619 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 GPR55Q9Y2T6 319 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MED13Q9UHV7 2174 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 ZZEF1O43149 2961 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CPAMD8Q8IZJ3 1885 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PRKNO60260 465 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms