RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CINPQ9BW66 212 aaPredicted RBP8.16□□□□□ -1.1
LSM5-208ENST00000450169 PAPOLGQ9BWT3 736 aaKnown RBP8.16□□□□□ -1.1
LSM5-208ENST00000450169 RNF32Q9H0A6 362 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 ANKRD19PQ9H560 264 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 DDX31Q9H8H2 851 aaKnown RBP8.16□□□□□ -1.1
LSM5-208ENST00000450169 CFAP97Q9P2B7 532 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 DUX4Q9UBX2 424 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 PCDHB7Q9Y5E2 793 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 GBF1Q92538 1859 aa8.16□□□□□ -1.1
LSM5-208ENST00000450169 NYNRINQ9P2P1 1898 aaKnown RBP8.16□□□□□ -1.1
LSM5-208ENST00000450169 SHISA3A0PJX4 238 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 C2orf78A6NCI8 922 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 J3KTA2 159 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 MANBAO00462 879 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 WNT10BO00744 389 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 SCAMP1O15126 338 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 FGF10O15520 208 aaPredicted RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 SLC28A2O43868 658 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 NIPSNAP2O75323 286 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 GADD45GO95257 159 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 PRPS2P11908 318 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 GABRA1P14867 456 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 PPP3CBP16298 524 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 VIPR1P32241 457 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 STARP49675 285 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 RENBPP51606 427 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 TNFRSF17Q02223 184 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 LGALS3BPQ08380 585 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 SERINC3Q13530 473 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 HEPACAMQ14CZ8 416 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 FAM74A1Q5RGS3 127 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 EFCAB12Q6NXP0 572 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 CEACAM20Q6UY09 585 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ARMCX2Q7L311 632 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 WDR53Q7Z5U6 358 aaPredicted RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 CTU1Q7Z7A3 348 aaKnown RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 STX12Q86Y82 276 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 STK40Q8N2I9 435 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 BPIFCQ8NFQ6 507 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 OR8J1Q8NGP2 316 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 CD200R1Q8TD46 325 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 SETD7Q8WTS6 366 aaKnown RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 GATAD2BQ8WXI9 593 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 PPP1R16BQ96T49 567 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 MNTQ99583 582 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 APOL5Q9BWW9 433 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ABCG8Q9H221 673 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 THSD1Q9NS62 852 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ACER3Q9NUN7 267 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 PIM2Q9P1W9 311 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 RPS6KB2Q9UBS0 482 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 NDOR1Q9UHB4 597 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 DSPPQ9NZW4 1301 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 DENND4AQ7Z401 1863 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ALPK3Q96L96 1907 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 PEX14O75381 377 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 POP7O75817 140 aaKnown RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 SOX14O95416 240 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 EGFP01133 1207 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 PIRTP0C851 137 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ZNF865P0CJ78 1059 aaPredicted RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 SDC1P18827 310 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 PCGF2P35227 344 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 CHI3L1P36222 383 aaPredicted RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 LIMS1P48059 325 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 RFX3P48380 749 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 GPR143P51810 404 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 STX4Q12846 297 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 SNTB1Q13884 538 aaKnown RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 CCDC157Q569K6 752 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 FBXO47Q5MNV8 452 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 IDNKQ5T6J7 187 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 RBMS3Q6XE24 437 aaKnown RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 B3GLCTQ6Y288 498 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 USP53Q70EK8 1073 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 MARCH9Q86YJ5 346 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 CBLN2Q8IUK8 224 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 SIAH3Q8IW03 269 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 TCEANCQ8N8B7 351 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ZFP41Q8N8Y5 198 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ZNF565Q8N9K5 539 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 L3MBTL4Q8NA19 623 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 DMBX1Q8NFW5 382 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 PHOSPHO2Q8TCD6 241 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ZFPM2Q8WW38 1151 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 C11orf24Q96F05 449 aaPredicted RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 TRMT2BQ96GJ1 504 aaKnown RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 PAWRQ96IZ0 340 aaKnown RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 COPS8Q99627 209 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 TMPRSS13Q9BYE2 586 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 ACPTQ9BZG2 426 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 BTBD1Q9H0C5 482 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 NSUN3Q9H649 340 aaKnown RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 NMNAT1Q9HAN9 279 aaPredicted RBP8.15□□□□□ -1.1
LSM5-208ENST00000450169 TPT1P8Q9HAU6 139 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 SLC6A20Q9NP91 592 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 GKN1Q9NS71 199 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 MARK1Q9P0L2 795 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 FZD4Q9ULV1 537 aa8.15□□□□□ -1.1
LSM5-208ENST00000450169 COL11A1P12107 1806 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms