RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DAOP14920 347 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 HIST1H1BP16401 226 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 MYL12AP19105 171 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ANXA7P20073 488 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 AGAP20933 346 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 PRPS1L1P21108 318 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ATP6V1B2P21281 511 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 FASP25445 335 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ELK4P28324 431 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 HOXA11P31270 313 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CSF2RBP32927 897 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RPS19P39019 145 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 PTGFRP43088 359 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 MAGEA6P43360 314 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 MAGEA12P43365 314 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CDKN1BP46527 198 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 LIMS1P48059 325 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 PPP3CCP48454 512 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 GNG10P50151 68 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CLRN1P58418 232 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SNRPD2P62316 118 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RAP1AP62834 184 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 VAMP2P63027 116 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 GPC5P78333 572 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CNTN1Q12860 1018 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ELAVL2Q12926 359 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRAF3Q13114 568 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ART3Q13508 389 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TP53BP2Q13625 1128 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 DYRK1AQ13627 763 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 USP10Q14694 798 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 PCLAFQ15004 111 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SEC23BQ15437 767 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TBCEQ15813 527 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF239Q16600 458 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CALCRLQ16602 461 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TATDN3Q17R31 274 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CTU2Q2VPK5 515 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RFX4Q33E94 735 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 LGALSLQ3ZCW2 172 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMEM119Q4V9L6 283 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMEM35AQ53FP2 167 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF691Q5VV52 312 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ANKRD22Q5VYY1 191 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF772Q68DY9 489 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RAET1GQ6H3X3 334 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ANKRD54Q6NXT1 300 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CDC73Q6P1J9 531 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TAF2Q6P1X5 1199 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SCYL2Q6P3W7 929 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RBMS3Q6XE24 437 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 MBOAT1Q6ZNC8 495 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 C17orf107Q6ZR85 190 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 LRRC8DQ7L1W4 858 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 NUP54Q7Z3B4 507 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ANKRD33Q7Z3H0 272 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC46A3Q7Z3Q1 461 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ADGRE4PQ86SQ3 457 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 PIGZQ86VD9 579 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC26A11Q86WA9 606 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 NAXDQ8IW45 347 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RIMKLAQ8IXN7 391 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 OFCC1Q8IZS5 231 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SYNE4Q8N205 404 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 PELI3Q8N2H9 469 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 C1orf52Q8N6N3 182 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM46DQ8NEK8 389 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR2L5Q8NG80 312 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR11H4Q8NGC9 324 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ADAMTS18Q8TE60 1221 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 DTD1Q8TEA8 209 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC20A1Q8WUM9 679 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMEM174Q8WUU8 243 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CANT1Q8WVQ1 401 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 C1orf54Q8WWF1 131 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SELENOMQ8WWX9 145 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ATG4AQ8WYN0 398 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CPT1BQ92523 772 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 NR4A3Q92570 626 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CENPIQ92674 756 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RSC1A1Q92681 617 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RORBQ92753 470 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RCN3Q96D15 328 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 ECHDC3Q96DC8 303 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 TCEAL4Q96EI5 215 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SIPA1Q96FS4 1042 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SCMH1Q96GD3 660 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 NARS2Q96I59 477 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 LRIG1Q96JA1 1093 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 LCORQ96JN0 433 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 RPL10LQ96L21 214 aaKnown RBP3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 C3orf30Q96M34 536 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 MBOAT7Q96N66 472 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 MUS81Q96NY9 551 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC38A2Q96QD8 506 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 CYP2S1Q96SQ9 504 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 MBOAT4Q96T53 435 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 GAD1Q99259 594 aa3.42□□□□□ -1.86
HMGB3P8-201ENST00000449709 SSX3Q99909 188 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms