RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 COLEC12Q5KU26 742 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 SLC25A45Q8N413 288 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 ADAMTS15Q8TE58 950 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 PHF10Q8WUB8 498 aaKnown RBP16.58■□□□□ 0.24
LMNA-208ENST00000448611 TMIGD2Q96BF3 282 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 DHRS1Q96LJ7 313 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 ALPK1Q96QP1 1244 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 NIPSNAP1Q9BPW8 284 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 NMNAT1Q9HAN9 279 aaPredicted RBP16.58■□□□□ 0.24
LMNA-208ENST00000448611 PAPOLBQ9NRJ5 636 aaKnown RBP16.58■□□□□ 0.24
LMNA-208ENST00000448611 LRIT1Q9P2V4 623 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 PLCL2Q9UPR0 1127 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 HCN4Q9Y3Q4 1203 aa16.58■□□□□ 0.24
LMNA-208ENST00000448611 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 A0A087WV62 115 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CASC3O15234 703 aaKnown RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 PLOD3O60568 738 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 SLITRK5O94991 958 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CCNB2O95067 398 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 ZIC2O95409 532 aaPredicted RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 LGI1O95970 557 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 GIMD1P0DJR0 217 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 ALDH4A1P30038 563 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 RPP38P78345 283 aaKnown RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 IL5RAQ01344 420 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CHRNEQ04844 493 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 BNIP3Q12983 259 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CDK5R2Q13319 367 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 PRICKLE4Q2TBC4 344 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 EXOSC6Q5RKV6 272 aaKnown RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 ATAD3BQ5T9A4 648 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 NKAIN2Q5VXU1 208 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 ZNF773Q6PK81 442 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 DEF8Q6ZN54 512 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 HMGN2P46Q86SG4 172 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CCDC71Q8IV32 467 aaPredicted RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 OR9Q2Q8NGE9 314 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 NCSTNQ92542 709 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 QRSL1Q9H0R6 528 aaKnown RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 CALML5Q9NZT1 146 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CLCA2Q9UQC9 943 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 POFUT2Q9Y2G5 429 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CSNK1G3Q9Y6M4 447 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CCDC163A0A0D9SF12 145 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 M0R3H8 397 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 NUDT21O43809 227 aaKnown RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 AGR2O95994 175 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 IFI6P09912 130 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CBLP22681 906 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 MLLT3P42568 568 aaPredicted RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 CTSKP43235 329 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 MGAT2Q10469 447 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 NDUFA9Q16795 377 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 ZNF770Q6IQ21 691 aaPredicted RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 C16orf62Q7Z3J2 963 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 TSPYL5Q86VY4 417 aaPredicted RBP16.57■□□□□ 0.24
LMNA-208ENST00000448611 CNIH3Q8TBE1 160 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 ZNF675Q8TD23 568 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 CDS1Q92903 461 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 ZDHHC12Q96GR4 267 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 HRASLS5Q96KN8 279 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 APOL4Q9BPW4 351 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 PINK1Q9BXM7 581 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 MAT2BQ9NZL9 334 aa16.57■□□□□ 0.24
LMNA-208ENST00000448611 THADAQ6YHU6 1953 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 CCDC88CQ9P219 2028 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 TRBV4-1A0A0J9YWV2 114 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 ACP2P11117 423 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 NT5EP21589 574 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 FNTBP49356 437 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 PPM1FP49593 454 aaPredicted RBP16.56■□□□□ 0.24
LMNA-208ENST00000448611 PDX1P52945 283 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 TOP3AQ13472 1001 aaPredicted RBP16.56■□□□□ 0.24
LMNA-208ENST00000448611 FAM53BQ14153 422 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 DOK4Q8TEW6 326 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 SLC9A6Q92581 669 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 ZNF566Q969W8 418 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 ZG16BQ96DA0 208 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 CD180Q99467 661 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 PDE7BQ9NP56 450 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 SOHLH2Q9NX45 425 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 A4GNTQ9UNA3 340 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 SLC9A8Q9Y2E8 581 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 CEPT1Q9Y6K0 416 aa16.56■□□□□ 0.24
LMNA-208ENST00000448611 HYKKA2RU49 373 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 SLC1A7O00341 560 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 FCMRO60667 390 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 NSA2O95478 260 aaKnown RBP16.55■□□□□ 0.24
LMNA-208ENST00000448611 ZBTB11O95625 1053 aaPredicted RBP16.55■□□□□ 0.24
LMNA-208ENST00000448611 PAX7P23759 505 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 OR1D5P58170 312 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 GABARAPL2P60520 117 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 SKP1P63208 163 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 BNC1Q01954 994 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 SHBQ15464 509 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 DUSP5Q16690 384 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 GARNL3Q5VVW2 1013 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 NIPAL1Q6NVV3 410 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 SLC35F3Q8IY50 421 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 OR6T1Q8NGN1 323 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms