RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PIK3C2AO00443 1686 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 PHYHO14832 338 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SORBS2O94875 1100 aaKnown RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 AMY2AP04746 511 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 HOXB2P14652 356 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 JAG1P78504 1218 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 VEZF1Q14119 521 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 UBXN2BQ14CS0 331 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 RAB11BQ15907 218 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 UPP1Q16831 310 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 RAB41Q5JT25 222 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 METTL11BQ5VVY1 283 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 PLBD1Q6P4A8 553 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 DCP2Q8IU60 420 aaKnown RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 RASGRP3Q8IV61 690 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 OR2T4Q8NH00 348 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 RAB7BQ96AH8 199 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 MMABQ96EY8 250 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ELMOD3Q96FG2 381 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 MSLNLQ96KJ4 702 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 PCYT2Q99447 389 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SLC2A11Q9BYW1 496 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 GSTO2Q9H4Y5 243 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 NMNAT1Q9HAN9 279 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TXNRD2Q9NNW7 524 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TEX10Q9NXF1 929 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 GPRC5BQ9NZH0 403 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SLC7A11Q9UPY5 501 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 AFDNP55196 1824 aaKnown RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 PIGBOS1A0A0B4J2F0 54 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 C2orf74A8MZ97 194 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 C1orf196B1AJZ1 125 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 RTCAO00442 366 aaKnown RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ARL3P36405 182 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 NR4A2P43354 598 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 LSSP48449 732 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 HNRNPFP52597 415 aaKnown RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TAS2R38P59533 333 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 PLGLB1Q02325 96 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 LMAN2Q12907 356 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 CNIH2Q6PI25 160 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SLC16A9Q7RTY1 509 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 GPRIN1Q7Z2K8 1008 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ZER1Q7Z7L7 766 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ANKK1Q8NFD2 765 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 OR52E2Q8NGJ4 325 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 OR6Q1Q8NGQ2 317 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TRMT10AQ8TBZ6 339 aaKnown RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 MAL2Q969L2 176 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 PTCHD1Q96NR3 888 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 IL17FQ96PD4 163 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 OR2M4Q96R27 311 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 FIZ1Q96SL8 496 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 FAM83CQ9BQN1 747 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SLC6A16Q9GZN6 736 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 MEPEQ9NQ76 525 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 AGPAT4Q9NRZ5 378 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 MYO10Q9HD67 2058 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 MYH8P13535 1937 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ADH1BP00325 375 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 SOD2P04179 222 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 MAS1P04201 325 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 PITPNBP48739 271 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 STK19P49842 368 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-204ENST00000448183 VSX2P58304 361 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-204ENST00000448183 SLC26A5P58743 744 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 SELENOWP63302 87 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 PLP2Q04941 152 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 TUBB3Q13509 450 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 RIN1Q13671 783 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 APOFQ13790 326 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 RGNQ15493 299 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 PLAG1Q6DJT9 500 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 CNKSR3Q6P9H4 555 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF440Q8IYI8 595 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 SORT1Q99523 831 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 WDR77Q9BQA1 342 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-204ENST00000448183 PELOQ9BRX2 385 aaKnown RBP7.4□□□□□ -1.22
NEDD9-204ENST00000448183 DPH7Q9BTV6 452 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 RBCK1Q9BYM8 510 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 MVB12BQ9H7P6 319 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 NDUFAF4Q9P032 175 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 KLHL21Q9UJP4 597 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 GPR52Q9Y2T5 361 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 CEPT1Q9Y6K0 416 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 LMO7Q8WWI1 1683 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 LOC285095A0A1B0GVY8 99 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 NAP1L6A6NFF2 107 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 TRIM64A6NGJ6 449 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 TVP23AA6NH52 213 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 PRAF2O60831 178 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 TRAPPC6AO75865 159 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 DIRAS3O95661 229 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 AKR1C4P17516 323 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 CAMLGP49069 296 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 INHBCP55103 352 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 CYCSP99999 105 aaKnown RBP7.4□□□□□ -1.22
NEDD9-204ENST00000448183 SOX4Q06945 474 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-204ENST00000448183 GPM6BQ13491 265 aa7.4□□□□□ -1.22
NEDD9-204ENST00000448183 SF3A2Q15428 464 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms