RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 IL21RQ9HBE5 538 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 PRDM9Q9NQV7 894 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 TPRKBQ9Y3C4 175 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 TMX2-CTNND1H3BSU7 103 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 CYR61O00622 381 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 FGF17O60258 216 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 LGI1O95970 557 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 H1F0P07305 194 aaKnown RBP16.36■□□□□ 0.21
SMC6-206ENST00000446852 CHRNEQ04844 493 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 ELOCQ15369 112 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 PRAMEF8Q5VWM4 474 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 PRAMEF7Q5VXH5 474 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 SAMD14Q8IZD0 417 aaPredicted RBP16.36■□□□□ 0.21
SMC6-206ENST00000446852 SIX5Q8N196 739 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 OR6T1Q8NGN1 323 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 LMX1AQ8TE12 382 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 DOK4Q8TEW6 326 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 MUL1Q969V5 352 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 SLC35A4Q96G79 324 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 CNDP2Q96KP4 475 aaKnown RBP16.36■□□□□ 0.21
SMC6-206ENST00000446852 CCDC3Q9BQI4 270 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 FUZQ9BT04 418 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 SPATA5L1Q9BVQ7 753 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 FBXL21Q9UKT6 434 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 COLQQ9Y215 455 aaPredicted RBP16.36■□□□□ 0.21
SMC6-206ENST00000446852 VCANP13611 3396 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 TLR4O00206 839 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 UBXN7O94888 489 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 ATE1O95260 518 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 CDH3P22223 829 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 FASLGP48023 281 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 RPL6Q02878 288 aaKnown RBP16.36■□□□□ 0.21
SMC6-206ENST00000446852 EMX1Q04741 257 aaPredicted RBP16.36■□□□□ 0.21
SMC6-206ENST00000446852 NPTX1Q15818 432 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 CWF19L1Q69YN2 538 aaKnown RBP16.36■□□□□ 0.21
SMC6-206ENST00000446852 CCDC103Q8IW40 242 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 CA13Q8N1Q1 262 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 ARHGEF39Q8N4T4 335 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 C19orf47Q8N9M1 422 aaKnown RBP16.36■□□□□ 0.21
SMC6-206ENST00000446852 AVL9Q8NBF6 648 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 DGCR6LQ9BY27 220 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 MIR1-1HGQ9H1L0 117 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 GIN1Q9NXP7 522 aa16.36■□□□□ 0.21
SMC6-206ENST00000446852 SGK494L7N484 410 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 FAM20BO75063 409 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 PORP16435 677 aaPredicted RBP16.35■□□□□ 0.21
SMC6-206ENST00000446852 ITIH1P19827 911 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 IDH2P48735 452 aaKnown RBP16.35■□□□□ 0.21
SMC6-206ENST00000446852 SH3BGRP55822 239 aaPredicted RBP16.35■□□□□ 0.21
SMC6-206ENST00000446852 RACK1P63244 317 aaKnown RBP16.35■□□□□ 0.21
SMC6-206ENST00000446852 TRMT12Q53H54 448 aaKnown RBP16.35■□□□□ 0.21
SMC6-206ENST00000446852 ZNF628Q5EBL2 1059 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 ZNF540Q8NDQ6 660 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 CADM4Q8NFZ8 388 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 SLC7A13Q8TCU3 470 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 TRNT1Q96Q11 434 aaKnown RBP16.35■□□□□ 0.21
SMC6-206ENST00000446852 SCN3BQ9NY72 215 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 TMCC3Q9ULS5 477 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 LIPT1Q9Y234 373 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 PCDHGB1Q9Y5G3 927 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 PCDHGA10Q9Y5H3 936 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 HEMK1Q9Y5R4 338 aaPredicted RBP16.35■□□□□ 0.21
SMC6-206ENST00000446852 COL6A3P12111 3177 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 SLC9B1P1A6NJY1 282 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 M0R129 80 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 FCMRO60667 390 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 INMTO95050 263 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 PDX1P52945 283 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 MAPK10P53779 464 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 TUBA3CQ13748 450 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 DCST1Q5T197 706 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 FHL5Q5TD97 284 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 HEPHL1Q6MZM0 1159 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 C16orf62Q7Z3J2 963 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 ADAMTS15Q8TE58 950 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 FAR1Q8WVX9 515 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 CDS1Q92903 461 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 PINK1Q9BXM7 581 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 MAN2C1Q9NTJ4 1040 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 WNT16Q9UBV4 365 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 FTSJ1Q9UET6 329 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 SLC6A14Q9UN76 642 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 SLC9A8Q9Y2E8 581 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 SDK1Q7Z5N4 2213 aa16.35■□□□□ 0.21
SMC6-206ENST00000446852 CASC3O15234 703 aaKnown RBP16.34■□□□□ 0.21
SMC6-206ENST00000446852 RDH16O75452 317 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 UGT2B17O75795 530 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 GP2P55259 537 aaKnown RBP16.34■□□□□ 0.21
SMC6-206ENST00000446852 PTGES3Q15185 160 aaKnown RBP16.34■□□□□ 0.21
SMC6-206ENST00000446852 FAM214AQ32MH5 1076 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 TMEM236Q5W0B7 351 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 CDC73Q6P1J9 531 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 IQCHQ86VS3 1027 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 VRK2Q86Y07 508 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 RHOXF1Q8NHV9 184 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 HSPA12BQ96MM6 686 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 ZNF226Q9NYT6 803 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 PTGFRNQ9P2B2 879 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 CHST2Q9Y4C5 530 aa16.34■□□□□ 0.21
SMC6-206ENST00000446852 FAAHO00519 579 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms