RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SOX30O94993 753 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 CBX7O95931 251 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 S1PR1P21453 382 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 GPX3P22352 226 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 PPICP45877 212 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 PRIM2P49643 509 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 ARFIP2P53365 341 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 KCNK10P57789 538 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 UFM1P61960 85 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 MRPS22P82650 360 aaKnown RBP13.05□□□□□ -0.32
SSBP3-208ENST00000444533 MGAT2Q10469 447 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 TP53BP2Q13625 1128 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 SQLEQ14534 574 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 INAQ16352 499 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 MAPKAPK3Q16644 382 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 NADK2Q4G0N4 442 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 ZNF766Q5HY98 468 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 METTL21CQ5VZV1 264 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 TMEM198Q66K66 360 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 OR4F3Q6IEY1 312 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 RTL4Q6ZR62 310 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 PRICKLE2Q7Z3G6 844 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 OR2L13Q8N349 312 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 NUP43Q8NFH3 380 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 OR56A1Q8NGH5 318 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 OR4A15Q8NGL6 344 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 MS4A4EQ96PG1 132 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 OR52E6Q96RD3 313 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 EBF4Q9BQW3 602 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 Q9N2J8 555 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 SDR39U1Q9NRG7 319 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-208ENST00000444533 ZCCHC3Q9NUD5 404 aaKnown RBP13.05□□□□□ -0.32
SSBP3-208ENST00000444533 FAF1Q9UNN5 650 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-208ENST00000444533 KLF13Q9Y2Y9 288 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-208ENST00000444533 FAM208BQ5VWN6 2430 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 FRG2CA6NGY1 282 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 B8ZZF3 427 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 KLRC4-KLRK1H3BQV0 150 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 UPK1AO00322 258 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 ANP32DO95626 131 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 C6orf47O95873 294 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 P04436 131 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 PGRP06401 933 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 EFNA1P20827 205 aaPredicted RBP13.04□□□□□ -0.32
SSBP3-208ENST00000444533 DRD5P21918 477 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 IL12BP29460 328 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 SOX3P41225 446 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 CCT3P49368 545 aaKnown RBP13.04□□□□□ -0.32
SSBP3-208ENST00000444533 EMDP50402 254 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 ATP4BP51164 291 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 POLR2JP52435 117 aaKnown RBP13.04□□□□□ -0.32
SSBP3-208ENST00000444533 PSMD4P55036 377 aaKnown RBP13.04□□□□□ -0.32
SSBP3-208ENST00000444533 PLCXD2Q0VAA5 305 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 SPANXN4Q5MJ08 99 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 SPINK14Q6IE38 97 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 SLC25A25Q6KCM7 469 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 ZCCHC12Q6PEW1 402 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 CPLX4Q7Z7G2 160 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 GOLM1Q8NBJ4 401 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 FAM13CQ8NE31 585 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 CATSPER1Q8NEC5 780 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 JADE3Q92613 823 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 BBC3Q96PG8 261 aaPredicted RBP13.04□□□□□ -0.32
SSBP3-208ENST00000444533 NPAS2Q99743 824 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 TMEM120AQ9BXJ8 343 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 ITPAQ9BY32 194 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 FOLH1BQ9HBA9 442 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 EQTNQ9NQ60 294 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 KLHL1Q9NR64 748 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 AGPAT4Q9NRZ5 378 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 TMEM45AQ9NWC5 275 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 PCDHGB6Q9Y5F9 930 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 PCDHGB3Q9Y5G1 929 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 NPFFR2Q9Y5X5 522 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 PIEZO2Q9H5I5 2752 aa13.04□□□□□ -0.32
SSBP3-208ENST00000444533 ATMQ13315 3056 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 FAM234BA2RU67 622 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 ANKRD28O15084 1053 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 HS6ST1O60243 411 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 MAN1A2O60476 641 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 OR6B1O95007 311 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 KCNH1O95259 989 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 RASAL1O95294 804 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 CPSF4O95639 269 aaKnown RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 CLPSP04118 112 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 SP1P08047 785 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 NAGAP17050 411 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 CD97P48960 835 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 ANXA11P50995 505 aaKnown RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 FAM180AQ6UWF9 173 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 TMEM64Q6YI46 380 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 C16orf47Q6ZP98 133 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 MSANTD1Q6ZTZ1 278 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 SLC44A2Q8IWA5 706 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 AMER2Q8N7J2 671 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms