RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 STEAP3Q658P3 488 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 Q6ZPB1 254 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 SPRED1Q7Z699 444 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PDZD3Q86UT5 571 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 AVL9Q8NBF6 648 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 OR13H1Q8NG92 308 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 RHBDD1Q8TEB9 315 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PATE1Q8WXA2 126 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 RIT1Q92963 219 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 INSM2Q96T92 566 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PLA2G2FQ9BZM2 168 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 ERVK13-1Q9NX77 482 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 PHF11Q9UIL8 331 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 ENPP5Q9UJA9 477 aa10.04□□□□□ -0.8
TOP3B-210ENST00000444502 DNMT3AQ9Y6K1 912 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-210ENST00000444502 NBASA2RRP1 2371 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 CPSF4LA6NMK7 179 aaKnown RBP10.03□□□□□ -0.8
TOP3B-210ENST00000444502 KRT33AO76009 404 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 UBXN7O94888 489 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 C1orf105O95561 183 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 ALPLP05186 524 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 IL18R1Q13478 541 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 TIGD6Q17RP2 521 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 CDKL4Q5MAI5 379 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 AGAP6Q5VW22 663 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 IL22RA1Q8N6P7 574 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 OR4K14Q8NGD5 310 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 AGAP4Q96P64 663 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 TMEM121BQ9BXQ6 578 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-210ENST00000444502 SLC22A1O15245 554 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 TCF3P15923 654 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 PRLHRP49683 370 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 KHKP50053 298 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 VLDLRP98155 873 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 CLEC12AQ5QGZ9 265 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 RTL4Q6ZR62 310 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 TIGD4Q8IY51 512 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 TMEM156Q8N614 296 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 ZNF248Q8NDW4 579 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 OR2L2Q8NH16 312 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 HCAR2Q8TDS4 363 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 SLC38A4Q969I6 547 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 TXNDC15Q96J42 360 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 RDH12Q96NR8 316 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 MCCC1Q96RQ3 725 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-210ENST00000444502 CPNE7Q9UBL6 633 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 MYOFQ9NZM1 2061 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 SBF1O95248 1867 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 A0A1B0GVT2 93 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 GRXCR2A6NFK2 248 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 BCAT2O15382 392 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-210ENST00000444502 PCDHGA12O60330 932 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 FCER2P06734 321 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 OR12D1P0DN82 309 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 TNFRSF4P43489 277 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 SLC15A1P46059 708 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 HBA1P69905 142 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 IFITM3Q01628 133 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 PCDH1Q08174 1060 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 NFATC4Q14934 902 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 REEP3Q6NUK4 255 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 CDC73Q6P1J9 531 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 UNC5DQ6UXZ4 953 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 SLC5A8Q8N695 610 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 FAM98AQ8NCA5 519 aaKnown RBP10.03□□□□□ -0.8
TOP3B-210ENST00000444502 Q96MT0 163 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 SLC38A2Q96QD8 506 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 PSD2Q9BQI7 771 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 PRRG4Q9BZD6 226 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 ACTL8Q9H568 366 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 RANGRFQ9HD47 186 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-210ENST00000444502 TRPM6Q9BX84 2022 aa10.03□□□□□ -0.8
TOP3B-210ENST00000444502 SLC9B1P1A6NJY1 282 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 UPK1BO75841 260 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 FOSL1P15407 271 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 SPNP16150 400 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 DDCP20711 480 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 PIGAP37287 484 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 TAGLNQ01995 201 aaKnown RBP10.02□□□□□ -0.8
TOP3B-210ENST00000444502 ZNF630Q2M218 657 aaPredicted RBP10.02□□□□□ -0.8
TOP3B-210ENST00000444502 TIMM50Q3ZCQ8 353 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 RPS26P11Q5JNZ5 115 aaPredicted RBP10.02□□□□□ -0.8
TOP3B-210ENST00000444502 TMEM107Q6UX40 140 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 HDDC2Q7Z4H3 204 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 L3MBTL4Q8NA19 623 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 OR9Q2Q8NGE9 314 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 OR13F1Q8NGS4 319 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 MAFAQ8NHW3 353 aaPredicted RBP10.02□□□□□ -0.8
TOP3B-210ENST00000444502 FAM129BQ96TA1 746 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 SLC6A13Q9NSD5 602 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 KLHL42Q9P2K6 505 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 HCN4Q9Y3Q4 1203 aa10.02□□□□□ -0.8
TOP3B-210ENST00000444502 NINQ8N4C6 2090 aa10.02□□□□□ -0.81
TOP3B-210ENST00000444502 TRBV5-4A0A0C4DH59 114 aa10.02□□□□□ -0.81
TOP3B-210ENST00000444502 HPRP00739 348 aa10.02□□□□□ -0.81
TOP3B-210ENST00000444502 ALPPP05187 535 aa10.02□□□□□ -0.81
TOP3B-210ENST00000444502 F3P13726 295 aa10.02□□□□□ -0.81
TOP3B-210ENST00000444502 CCKBRP32239 447 aa10.02□□□□□ -0.81
TOP3B-210ENST00000444502 ADPRHP54922 357 aa10.02□□□□□ -0.81
TOP3B-210ENST00000444502 CDK5R2Q13319 367 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms