RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 IL33O95760 270 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 GFERP55789 205 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 DMPKQ09013 629 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 FOXC1Q12948 553 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 DNM1P34Q6PK57 102 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 DEFB124Q8NES8 71 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 OR52R1Q8NGF1 315 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 OR2AJ1Q8NGZ0 328 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 DOHHQ9BU89 302 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 ZNF638Q14966 1978 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 FAM25AB3EWG3 89 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 FAM25CB3EWG5 89 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 FAM25GB3EWG6 89 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 DIRAS1O95057 198 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 HMGN2P05204 90 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 HOXC4P09017 264 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 HOXD12P35452 270 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 EFR3AQ14156 821 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 RCAN2Q14206 197 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 CLEC12AQ5QGZ9 265 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 KMT5CQ86Y97 462 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 SLC34A3Q8N130 599 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 OR6K6Q8NGW6 343 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 OR14L1PQ8NHC6 308 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 CREB3L4Q8TEY5 395 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 ALPK1Q96QP1 1244 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 SHROOM3Q8TF72 1996 aa13.31□□□□□ -0.28
SMARCA4-204ENST00000444061 ZNF28P17035 718 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 OR1E2P47887 323 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 EPHA4P54764 986 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 PAPD4Q6PIY7 484 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 SLC15A3Q8IY34 581 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 OR8H2Q8N162 312 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 OR2I1PQ8NGU4 316 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 SNX33Q8WV41 574 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 LRRC46Q96FV0 321 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 OR1F2PQ96R84 312 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 A0A0G2JPF8 293 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 VSTM2BA6NLU5 285 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 HNRNPCL3B7ZW38 293 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 NUDT21O43809 227 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 HNRNPCL4P0DMR1 293 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 ACVR2AP27037 513 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 ABHD17CQ6PCB6 329 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 TMPRSS11AQ6ZMR5 421 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 BPHLQ86WA6 291 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 GHDCQ8N2G8 530 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 BAHD1Q8TBE0 780 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 C3orf30Q96M34 536 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 DUSP15Q9H1R2 295 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 SPAG17Q6Q759 2223 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 PROM1O43490 865 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 TALDO1P37837 337 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 B4GALNT1Q00973 533 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 MESP2Q0VG99 397 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 EXOSC7Q15024 291 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 NPTX1Q15818 432 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 PLK5Q496M5 336 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 NT5DC2Q9H857 520 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 RNF121Q9H920 327 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 TRMUO75648 421 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 TNFSF15O95150 251 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 PTGER1P34995 402 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 CCL7P80098 99 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 PTGES3Q15185 160 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 ZFAND2BQ8WV99 257 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 OMA1Q96E52 524 aa13.3□□□□□ -0.28
SMARCA4-204ENST00000444061 LSM1O15116 133 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 SEC14L5O43304 696 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 ZSWIM7Q19AV6 140 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 DHRS13Q6UX07 377 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 THAP5Q7Z6K1 395 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 GPAT4Q86UL3 456 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 C19orf18Q8NEA5 215 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 CCDC74BQ96LY2 380 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 INPP5KQ9BT40 448 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 ELL3Q9HB65 397 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 FAM86C1Q9NVL1 165 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 PCDHA9Q9Y5H5 950 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 KRBA1A5PL33 1030 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 EFCAB9A8MZ26 197 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 CSO75390 466 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 CTBP2P56545 445 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 PPP1R8Q12972 351 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 PMS2P3Q13401 168 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 GTDC1Q4AE62 458 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 SFT2D3Q587I9 215 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 EFHD2Q96C19 240 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 SLAMF7Q9NQ25 335 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 CCDC187A0A096LP49 1063 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 CDK4P11802 303 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 CAPN3P20807 821 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 FPR1P21462 350 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 HTR1EP28566 365 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 DCAF7P61962 342 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 EIF4EBP2Q13542 120 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 TMEM44Q2T9K0 475 aa13.29□□□□□ -0.28
SMARCA4-204ENST00000444061 ABI3BPQ7Z7G0 1075 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms