RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 FEVQ99581 238 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 MAP3K3Q99759 626 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 SLC38A1Q9H2H9 487 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 SOHLH2Q9NX45 425 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 KLHL28Q9NXS3 571 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 SCN3BQ9NY72 215 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 MGAT4BQ9UQ53 548 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 IFT52Q9Y366 437 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 TPRKBQ9Y3C4 175 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 SIT1Q9Y3P8 196 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 EML5Q05BV3 1969 aa12.35□□□□□ -0.43
CPSF4-206ENST00000441580 HYKKA2RU49 373 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 EME2A4GXA9 379 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 J3KTA2 159 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 NUDT21O43809 227 aaKnown RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 DUX1O43812 170 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 AHCYL1O43865 530 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 OR6B1O95007 311 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 ZBTB11O95625 1053 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 LGI1O95970 557 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 ALOX5P09917 674 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 NT5EP21589 574 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 ELAVL4P26378 380 aaKnown RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 GSTT1P30711 240 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 IFNA8P32881 189 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 YAP1P46937 504 aaKnown RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 PPM1FP49593 454 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 GANABQ14697 944 aaKnown RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 MEP1AQ16819 746 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 EXOSC6Q5RKV6 272 aaKnown RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 DCST1Q5T197 706 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 FHL5Q5TD97 284 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 B3GNT6Q6ZMB0 384 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 KCTD8Q6ZWB6 473 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 PRSS41Q7RTY9 318 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 ZNF438Q7Z4V0 828 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 AQP11Q8NBQ7 271 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 OR52J3Q8NH60 311 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 VANGL1Q8TAA9 524 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 ZNF420Q8TAQ5 688 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 IPCEF1Q8WWN9 437 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 ARHGDIGQ99819 225 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 PELOQ9BRX2 385 aaKnown RBP12.34□□□□□ -0.43
CPSF4-206ENST00000441580 YIPF4Q9BSR8 244 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 PIGUQ9H490 435 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 ANKRD19PQ9H560 264 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 EVA1AQ9H8M9 152 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 POLR1BQ9H9Y6 1135 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 FAM60AQ9NP50 221 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 PDE7BQ9NP56 450 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 POLE3Q9NRF9 147 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 DUSP22Q9NRW4 184 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 TMEM9Q9P0T7 183 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 CEPT1Q9Y6K0 416 aa12.34□□□□□ -0.43
CPSF4-206ENST00000441580 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 A0A1W2PRQ8 180 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 SGK494L7N484 410 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF749O43361 778 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 KIF1CO43896 1103 aaKnown RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 OR10H2O60403 315 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 MPZL2O60487 215 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 THBS1P07996 1170 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 SLC35E2P0CK97 266 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 PAX7P23759 505 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 PTGER1P34995 402 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 AVPR1BP47901 424 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 GABRA4P48169 554 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 SNRPNP63162 240 aaKnown RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 RPP38P78345 283 aaKnown RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 GPLD1P80108 840 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 MVKQ03426 396 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 CDK5R2Q13319 367 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 TUBA3CQ13748 450 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 DGCR6Q14129 220 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 NR1D2Q14995 579 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 ARHGAP11BQ3KRB8 267 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 CYP27C1Q4G0S4 372 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF311Q5JNZ3 666 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 TCTN3Q6NUS6 607 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 B3GNT8Q7Z7M8 397 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 PEX5LQ8IYB4 626 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF595Q8IYB9 648 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 TMEFF1Q8IYR6 380 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 SVOPQ8N4V2 548 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 OR9Q2Q8NGE9 314 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 OR5T3Q8NGG3 340 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 PMM1Q92871 262 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 COL26A1Q96A83 441 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 OTUB1Q96FW1 271 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 C16orf58Q96GQ5 468 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 AHCYL2Q96HN2 611 aaKnown RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 FNDC11Q9BVV2 318 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 DGCR6LQ9BY27 220 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 POLR2J2Q9GZM3 115 aaKnown RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF350Q9GZX5 532 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 POLR2J3Q9H1A7 115 aaKnown RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 NMNAT1Q9HAN9 279 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 ENAMQ9NRM1 1142 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 IRAK4Q9NWZ3 460 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms