RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 ZNF23P17027 643 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 AGXTP21549 392 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CPN2P22792 545 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FRKP42685 505 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ANXA11P50995 505 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 DSTNP60981 165 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TNFRSF17Q02223 184 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 IL10RAQ13651 578 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SCARB2Q14108 478 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NCF4Q15080 339 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZNF630Q2M218 657 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 COX20Q5RI15 118 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 YOD1Q5VVQ6 348 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MLIPQ5VWP3 458 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TMEM214Q6NUQ4 689 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SZRD1Q7Z422 152 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NEURL3Q96EH8 262 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SLC35G5Q96KT7 338 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SLAMF7Q9NQ25 335 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 IFT80Q9P2H3 777 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CTSFQ9UBX1 484 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 BAG5Q9UL15 447 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ERVK-11Q9UQG0 969 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ATG4BQ9Y4P1 393 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZNF780BQ9Y6R6 833 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 IGSF10Q6WRI0 2623 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SCN3AQ9NY46 2000 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CCDC88CQ9P219 2028 aa13.63□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TMEM247A6NEH6 219 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZNF860A6NHJ4 632 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 GLOD5A6NK44 160 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 C21orf140B9A014 251 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 C5orf58C9J3I9 102 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 C9J4A7 227 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 K7ENP7 123 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TNFRSF21O75509 655 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PRKRAO75569 313 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CST1P01037 141 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NUDT7P0C024 238 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ALOX12P18054 663 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CSNK2A2P19784 350 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TLX1P31314 330 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CDK9P50750 372 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MAT1AQ00266 395 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FOLH1Q04609 750 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NRF1Q16656 503 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SYT16Q17RD7 645 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FAM214AQ32MH5 1076 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 DEFB134Q4QY38 66 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SAXO2Q658L1 398 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 C18orf63Q68DL7 685 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 OR52E8Q6IFG1 317 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FAM180BQ6P0A1 224 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SLC48A1Q6P1K1 146 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 INO80CQ6PI98 192 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SHISA6Q6ZSJ9 500 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 EIF3MQ7L2H7 374 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FAM86B1Q8N7N1 296 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 OR9A4Q8NGU2 314 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NFKBIDQ8NI38 313 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SFXN5Q8TD22 340 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MOAP1Q96BY2 351 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NR1H4Q96RI1 486 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MAPKAP1Q9BPZ7 522 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 GLIPR2Q9H4G4 154 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PRORYQ9H606 182 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TMEM38AQ9H6F2 299 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MS4A12Q9NXJ0 267 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 DNAJB9Q9UBS3 223 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 OAZ3Q9UMX2 235 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FARSAQ9Y285 508 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 AP4B1Q9Y6B7 739 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CFAP47Q6ZTR5 3102 aa13.62□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NBEAQ8NFP9 2946 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ATRXP46100 2492 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SGK494L7N484 410 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SUV39H1O43463 412 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PROM1O43490 865 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 IFNA14P01570 189 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 RAB40ALP0C0E4 278 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SMIM10L1P0DMW3 83 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ARAFP10398 606 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZNF26P17031 533 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FBLP22087 321 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 KHKP50053 298 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 EMP3P54852 163 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 UCNP55089 124 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CASP9P55211 416 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SKP1P63208 163 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CDK6Q00534 326 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TP53BP2Q13625 1128 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ADRM1Q16186 407 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 GARNL3Q5VVW2 1013 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PPP4R4Q6NUP7 873 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 BHLHB9Q6PI77 547 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TMEM64Q6YI46 380 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CBLL1Q75N03 491 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 EPHX4Q8IUS5 362 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZDHHC21Q8IVQ6 265 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PRSS58Q8IYP2 241 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms