RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 FUT4P22083 530 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FMO3P31513 532 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SOX18P35713 384 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SLC35A2P78381 396 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 C6orf132Q5T0Z8 1188 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 DCST1Q5T197 706 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 LAIR1Q6GTX8 287 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 OGFOD3Q6PK18 319 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 OLIG3Q7RTU3 272 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 C16orf62Q7Z3J2 963 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 CLVS1Q8IUQ0 354 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 LACC1Q8IV20 430 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 MCATQ8IVS2 390 aaKnown RBP11.04□□□□□ -0.64
SMAD3-202ENST00000439724 OR4N5Q8IXE1 308 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 TMEFF1Q8IYR6 380 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ENTHD1Q8IYW4 607 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 AQP11Q8NBQ7 271 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 OR13F1Q8NGS4 319 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF675Q8TD23 568 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 NR4A3Q92570 626 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 COL26A1Q96A83 441 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SLC35A4Q96G79 324 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 TCTN2Q96GX1 697 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ZNF285Q96NJ3 590 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 DOK1Q99704 481 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 MIR1-1HGQ9H1L0 117 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ANKRA2Q9H9E1 313 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 FANCEQ9HB96 536 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 ANKHQ9HCJ1 492 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 RHCGQ9UBD6 479 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 A4GNTQ9UNA3 340 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 PCDHGB1Q9Y5G3 927 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 SNX5Q9Y5X3 404 aa11.04□□□□□ -0.64
SMAD3-202ENST00000439724 CACNA1IQ9P0X4 2223 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 A0A1W2PRQ8 180 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 ENO4A6NNW6 628 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 M0R3H8 397 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 XPNPEP2O43895 674 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 PCDHGA12O60330 932 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 PLOD3O60568 738 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 WBP4O75554 376 aaKnown RBP11.03□□□□□ -0.64
SMAD3-202ENST00000439724 ALPPP05187 535 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 ITIH1P19827 911 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 KRT20P35900 424 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 MAPK10P53779 464 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 EPHA4P54764 986 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 SKP1P63208 163 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 ZP2Q05996 745 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 DGCR6Q14129 220 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 DEFB110Q30KQ9 67 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 FGD3Q5JSP0 725 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 GTF2IRD2BQ6EKJ0 949 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 NIPAL1Q6NVV3 410 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 DHRS4L2Q6PKH6 230 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 GTF2IRD2Q86UP8 949 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 RBM45Q8IUH3 476 aaKnown RBP11.03□□□□□ -0.64
SMAD3-202ENST00000439724 DEPDC4Q8N2C3 294 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 SLC16A11Q8NCK7 471 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 TMEM52Q8NDY8 209 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 OR5T3Q8NGG3 340 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 APH1BQ8WW43 257 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 DNASE2BQ8WZ79 361 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 MUL1Q969V5 352 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 PRRC1Q96M27 445 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 SLC38A3Q99624 504 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 MAP3K3Q99759 626 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 ARHGDIGQ99819 225 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 WFDC6Q9BQY6 131 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 CHRNA10Q9GZZ6 450 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 TRIM45Q9H8W5 580 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-202ENST00000439724 TMEM9Q9P0T7 183 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 FTSJ1Q9UET6 329 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 RNF6Q9Y252 685 aa11.03□□□□□ -0.64
SMAD3-202ENST00000439724 K7ESF4 209 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 SGK494L7N484 410 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 FAM20BO75063 409 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 LDB3O75112 727 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 RDH16O75452 317 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 TRMUO75648 421 aaKnown RBP11.02□□□□□ -0.65
SMAD3-202ENST00000439724 UGT2B17O75795 530 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 GASTP01350 101 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ACP2P11117 423 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 BCKDHBP21953 392 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 PCMT1P22061 227 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 PRKAR1BP31321 381 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 GABRA4P48169 554 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 HPCAP84074 193 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ROR2Q01974 943 aaKnown RBP11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ID2Q02363 134 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 CHRNEQ04844 493 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 SEC23BQ15437 767 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 NDUFA9Q16795 377 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ARHGAP11BQ3KRB8 267 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 C14orf28Q4W4Y0 310 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF311Q5JNZ3 666 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 MLIPQ5VWP3 458 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ZCCHC12Q6PEW1 402 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms