RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 N6AMT1Q9Y5N5 214 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 SLCO1B1Q9Y6L6 691 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 STSP08842 583 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 PXNP49023 591 aaPredicted RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 CCT3P49368 545 aaKnown RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 COL9A2Q14055 689 aaPredicted RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 PTGES3Q15185 160 aaKnown RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 NXNL2Q5VZ03 156 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 OR4C11Q6IEV9 310 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 KLHL17Q6TDP4 642 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 DEF8Q6ZN54 512 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 OR4E2Q8NGC2 313 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 LCN9Q8WX39 176 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 QRFPRQ96P65 431 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 DPH7Q9BTV6 452 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 TCEAL2Q9H3H9 227 aaPredicted RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 MRPS30Q9NP92 439 aaKnown RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 KLHL20Q9Y2M5 609 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 A6NCN8 305 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 CLDN24A6NM45 220 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 CLCA1A8K7I4 914 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 PRICKLE3O43900 615 aaPredicted RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 MFN2O95140 757 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 OR12D1P0DN82 309 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 F3P13726 295 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 GPC1P35052 558 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 BCL6P41182 706 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 SYPL1Q16563 259 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF542PQ5EBM4 170 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 PRPF38BQ5VTL8 546 aaKnown RBP13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 FBXL6Q8N531 539 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 IL17RDQ8NFM7 739 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 XAGE5Q8WWM1 108 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC38A4Q969I6 547 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 CENPOQ9BU64 300 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 ITPAQ9BY32 194 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC6A20Q9NP91 592 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 A4GALTQ9NPC4 353 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 TAS2R16Q9NYV7 291 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 UGT2A1Q9Y4X1 527 aa13.08□□□□□ -0.32
PTCHD3-201ENST00000438700 SCN3AQ9NY46 2000 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 IGHV1OR15-9A0A0B4J2B8 117 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 LRIT2A6NDA9 550 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 C4orf51C9J302 202 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC28A2O43868 658 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 SOX14O95416 240 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 THEGLP0DJG4 465 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 CBLP22681 906 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 NDUFS1P28331 727 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 PRKAG1P54619 331 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 ILF3Q12906 894 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF181Q2M3W8 571 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 AMIGO1Q86WK6 493 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 SIX5Q8N196 739 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 OR2L3Q8NG85 312 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 OR8K5Q8NH50 307 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 LILRB4Q8NHJ6 448 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 CREB3L4Q8TEY5 395 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 APOBEC4Q8WW27 367 aaKnown RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 DMRTB1Q96MA1 342 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 COL21A1Q96P44 957 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 YIPF4Q9BSR8 244 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 PITHD1Q9GZP4 211 aaPredicted RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 MMP27Q9H306 513 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 NT5DC2Q9H857 520 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 ERVK13-1Q9NX77 482 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 MS4A12Q9NXJ0 267 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 TRPC4Q9UBN4 977 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 KLF15Q9UIH9 416 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 TDRD6O60522 2096 aaKnown RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 A0A1W2PPC4 97 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 ISPDA4D126 451 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 TPD52L2O43399 206 aaKnown RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 ERI3O43414 337 aaKnown RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 ERAL1O75616 437 aaKnown RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 TNFP01375 233 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 CDK1P06493 297 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 GABRB1P18505 474 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 CHMP24386 653 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 FEN1P39748 380 aaKnown RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 HMGA2P52926 109 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 CSNK2BP67870 215 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 ST3GAL4Q11206 333 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 SEC23BQ15437 767 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 TIGD6Q17RP2 521 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF750Q32MQ0 723 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC30A8Q8IWU4 369 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 STX19Q8N4C7 294 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 DEFB119Q8N690 84 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 OR4D11Q8NGI4 311 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 MYDGFQ969H8 173 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 TREX2Q9BQ50 279 aaPredicted RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 GLIPR2Q9H4G4 154 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 DDX31Q9H8H2 851 aaKnown RBP13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 C11orf16Q9NQ32 467 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 SEC14L3Q9UDX4 400 aa13.07□□□□□ -0.32
PTCHD3-201ENST00000438700 A0A0A6YYD5 115 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 PRAMEF27A3QJZ7 478 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms