RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PTGS2P35354 604 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 SOX18P35713 384 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 EMDP50402 254 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 NCBP2P52298 156 aaKnown RBP eCLIP22.75■■□□□ 1.233e-6■■■■□ 21.7
RAPGEF1-206ENST00000438647 RPL38P63173 70 aaKnown RBP22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 FOXO1Q12778 655 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 DUSP8Q13202 625 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 TMEM64Q6YI46 380 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 MAMDC2Q7Z304 686 aaPredicted RBP22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 DIO2Q92813 273 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 KAT2AQ92830 837 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 PPP3R2Q96LZ3 170 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 DOHHQ9BU89 302 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 TUBA8Q9NY65 449 aaPredicted RBP22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 TINAGQ9UJW2 476 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 A0A1B0GTH9 108 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 DRD5P21918 477 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 TACR1P25103 407 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 PPICP45877 212 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 FBXW4P57775 412 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 PSPHP78330 225 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 GALNTL6Q49A17 601 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 RFTN2Q52LD8 501 aaPredicted RBP22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 MYO7BQ6PIF6 2116 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 CHERPQ8IWX8 916 aaKnown RBP22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 TMEM251Q8N6I4 163 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 ZNF764Q96H86 408 aaPredicted RBP22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 PKNOX2Q96KN3 472 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 DEFB127Q9H1M4 99 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 ZFP64Q9NPA5 681 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 KCNK9Q9NPC2 374 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 TAS2R9Q9NYW1 312 aa22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 CNOT11Q9UKZ1 510 aaKnown RBP22.74■■□□□ 1.23
RAPGEF1-206ENST00000438647 FRG2CA6NGY1 282 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 TMEM114B3SHH9 223 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 COQ9O75208 318 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 PPM1BO75688 479 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 SNUPNO95149 360 aaKnown RBP22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 HSPA4LO95757 839 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 SERPINE1P05121 402 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 JUNP05412 331 aaKnown RBP22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 DDX5P17844 614 aaKnown RBP22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 SDC1P18827 310 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 MAPK1P28482 360 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 MAGEA5P43359 124 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 ASMTP46597 345 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 PLCXD2Q0VAA5 305 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 NNATQ16517 81 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 RPTNQ6XPR3 784 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 PRR22Q8IZ63 422 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 SIMC1Q8NDZ2 872 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 SPPL2AQ8TCT8 520 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 CCDC120Q96HB5 630 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 EGLN2Q96KS0 407 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 B4GALT7Q9UBV7 327 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 ZDHHC2Q9UIJ5 367 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 EXO1Q9UQ84 846 aaKnown RBP22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 GTF3C1Q12789 2109 aa22.73■■□□□ 1.23
RAPGEF1-206ENST00000438647 A0A087WV62 115 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 WDR91A4D1P6 747 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 TO15178 435 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 PDE9AO76083 593 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 SNX4O95219 450 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 ARRB2P32121 409 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 CHI3L2Q15782 390 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 XKR7Q5GH72 579 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 TMEM198Q66K66 360 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 FGD2Q7Z6J4 655 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 KIRREL3Q8IZU9 778 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 OR7G2Q8NG99 324 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 FAM57AQ8TBR7 257 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 OMA1Q96E52 524 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 ZNF597Q96LX8 424 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 TSSK3Q96PN8 268 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 BTBD9Q96Q07 612 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 REEP4Q9H6H4 257 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 GPR55Q9Y2T6 319 aaPredicted RBP22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 EML6Q6ZMW3 1958 aa22.72■■□□□ 1.23
RAPGEF1-206ENST00000438647 TBX19O60806 448 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 IGHG3P01860 377 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 TPOP07202 933 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 ABCB1P08183 1280 aaPredicted RBP22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 DHRS4L1P0CG22 281 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 GRK2P25098 689 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 SLC10A1Q14973 349 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 ATP6AP1LQ52LC2 224 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 NUP54Q7Z3B4 507 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 DOLPP1Q86YN1 238 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 SLC34A3Q8N130 599 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 GFM2Q969S9 779 aaKnown RBP22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 PPCDCQ96CD2 204 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 JSRP1Q96MG2 331 aaPredicted RBP22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 VSTM2LQ96N03 204 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 AMDHD1Q96NU7 426 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 GLIPR2Q9H4G4 154 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 ZNF703Q9H7S9 590 aaPredicted RBP22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 PROK2Q9HC23 129 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 QPCTLQ9NXS2 382 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 MEMO1Q9Y316 297 aa22.71■■□□□ 1.23
RAPGEF1-206ENST00000438647 OR14I1A6ND48 311 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms