RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 Q8NA96 180 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 MDS2Q8NDY4 140 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 VPS37AQ8NEZ2 397 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 ACTRT2Q8TDY3 377 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 NUDT8Q8WV74 236 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 CTHRC1Q96CG8 243 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 ELP4Q96EB1 424 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 BHLHE41Q9C0J9 482 aaPredicted RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 FOLH1BQ9HBA9 442 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 AGPAT4Q9NRZ5 378 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 ZNF639Q9UID6 485 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 DCTN4Q9UJW0 460 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 DTX4Q9Y2E6 619 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 KLF13Q9Y2Y9 288 aaPredicted RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 PCDHGA10Q9Y5H3 936 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 SVILO95425 2214 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 A0A087WV62 115 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 CDK2AP1O14519 115 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 EDF1O60869 148 aaKnown RBP14.34□□□□□ -0.11
TREX1-201ENST00000433541 ERN1O75460 977 aaKnown RBP14.34□□□□□ -0.11
TREX1-201ENST00000433541 NEURL1O76050 574 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 C6orf47O95873 294 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 P04436 131 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 S100A3P33764 101 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 KIR3DL1P43629 444 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 IDH3AP50213 366 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 CDK9P50750 372 aaKnown RBP14.34□□□□□ -0.11
TREX1-201ENST00000433541 UFM1P61960 85 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 DCAF7P61962 342 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 PRR5P85299 388 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 SRSF11Q05519 484 aaKnown RBP14.34□□□□□ -0.11
TREX1-201ENST00000433541 PLCXD2Q0VAA5 305 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 DPY19L1Q2PZI1 675 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 OR4F3Q6IEY1 312 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 RGS9BPQ6ZS82 235 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 JADE3Q92613 823 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 TP53INP1Q96A56 240 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 LCORQ96JN0 433 aaPredicted RBP14.34□□□□□ -0.11
TREX1-201ENST00000433541 MAELQ96JY0 434 aaKnown RBP14.34□□□□□ -0.11
TREX1-201ENST00000433541 EBF4Q9BQW3 602 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 NXF5Q9H1B4 397 aaKnown RBP14.34□□□□□ -0.11
TREX1-201ENST00000433541 ZCCHC3Q9NUD5 404 aaKnown RBP14.34□□□□□ -0.11
TREX1-201ENST00000433541 NPFFR2Q9Y5X5 522 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 CFAP46Q8IYW2 2715 aa14.34□□□□□ -0.11
TREX1-201ENST00000433541 A0A0G2JND7 137 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 C9JVG2 144 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 KLRC4-KLRK1H3BQV0 150 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 UPK1AO00322 258 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 PLOD2O00469 737 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 TP53I11O14683 189 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 NME6O75414 186 aaPredicted RBP14.33□□□□□ -0.12
TREX1-201ENST00000433541 IL12BP29460 328 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 RFX3P48380 749 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 EMDP50402 254 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 GPR85P60893 370 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 PMP22Q01453 160 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 SF3A3Q12874 501 aaKnown RBP eCLIP14.33□□□□□ -0.12
TREX1-201ENST00000433541 DUSP8Q13202 625 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 TP53BP2Q13625 1128 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 INAQ16352 499 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 GSTA3Q16772 222 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 FAM174BQ3ZCQ3 159 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 MDGA2Q7Z553 956 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 SLC44A2Q8IWA5 706 aaPredicted RBP14.33□□□□□ -0.12
TREX1-201ENST00000433541 RIMKLAQ8IXN7 391 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 MIER2Q8N344 545 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 OR2L13Q8N349 312 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 PSD4Q8NDX1 1056 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 NUP43Q8NFH3 380 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 OR4A15Q8NGL6 344 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 FBXO30Q8TB52 745 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 OR5P2Q8WZ92 322 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 ADIPOR1Q96A54 375 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 COQ8BQ96D53 544 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 SNRNP40Q96DI7 357 aaKnown RBP14.33□□□□□ -0.12
TREX1-201ENST00000433541 SPACA9Q96E40 222 aaPredicted RBP14.33□□□□□ -0.12
TREX1-201ENST00000433541 HSPBAP1Q96EW2 488 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 NEUROD4Q9HD90 331 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 SACM1LQ9NTJ5 587 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 FGFR1OP2Q9NVK5 253 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 C19orf53Q9UNZ5 99 aaPredicted RBP14.33□□□□□ -0.12
TREX1-201ENST00000433541 NINQ8N4C6 2090 aa14.33□□□□□ -0.12
TREX1-201ENST00000433541 FRG2CA6NGY1 282 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 G3V3Y1 287 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 ZNF195O14628 629 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 ACOX3O15254 700 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 EMC8O43402 210 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 NME2P1O60361 137 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 ZNF354AO60765 605 aaPredicted RBP14.32□□□□□ -0.12
TREX1-201ENST00000433541 REM1O75628 298 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 SLC22A3O75751 556 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 NADKO95544 446 aaPredicted RBP14.32□□□□□ -0.12
TREX1-201ENST00000433541 CPSF4O95639 269 aaKnown RBP14.32□□□□□ -0.12
TREX1-201ENST00000433541 CRYABP02511 175 aaKnown RBP14.32□□□□□ -0.12
TREX1-201ENST00000433541 NCF2P19878 526 aaPredicted RBP14.32□□□□□ -0.12
TREX1-201ENST00000433541 NME2P22392 152 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 ABCD3P28288 659 aa14.32□□□□□ -0.12
TREX1-201ENST00000433541 MDH1P40925 334 aaKnown RBP14.32□□□□□ -0.12
TREX1-201ENST00000433541 FRKP42685 505 aaPredicted RBP14.32□□□□□ -0.12
TREX1-201ENST00000433541 PPICP45877 212 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms