RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 DUSP8Q13202 625 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MYBPHQ13203 477 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 PRICKLE4Q2TBC4 344 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ACSF3Q4G176 576 aaPredicted RBP8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 NHSL2Q5HYW2 709 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CCNYL2Q5T2Q4 361 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CES4AQ5XG92 561 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TMEM198Q66K66 360 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 SLC48A1Q6P1K1 146 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 LETMD1Q6P1Q0 360 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 POMZP3Q6PJE2 187 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TAOK1Q7L7X3 1001 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 COMMD6Q7Z4G1 85 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TMEM200AQ86VY9 491 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MMP21Q8N119 569 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 LIX1Q8N485 282 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 RELL2Q8NC24 303 aaPredicted RBP8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 NAXEQ8NCW5 288 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 OR7G1Q8NGA0 311 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 OR4F6Q8NGB9 312 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ZNF483Q8TF39 744 aaPredicted RBP8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 DCAKDQ8WVC6 231 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ATP6V1E2Q96A05 226 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TIMP4Q99727 224 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MRPL57Q9BQC6 102 aaKnown RBP8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 PRDM14Q9GZV8 571 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TSPYL1Q9H0U9 437 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MRPL46Q9H2W6 279 aaKnown RBP8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ELOVL6Q9H5J4 265 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 BRF2Q9HAW0 419 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 FARSBQ9NSD9 589 aaKnown RBP8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ALKBH4Q9NXW9 302 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 AHSPQ9NZD4 102 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MTRF1LQ9UGC7 380 aaKnown RBP8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 DMGDHQ9UI17 866 aaKnown RBP8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ZNF639Q9UID6 485 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ZNF180Q9UJW8 692 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 DTX4Q9Y2E6 619 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 PCDHA9Q9Y5H5 950 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 AKAP6Q13023 2319 aa8.61□□□□□ -1.03
CDC42-IT1-201ENST00000431803 C15orf38-AP3S2A0A0A6YYH1 394 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 C1orf226A1L170 272 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 FAM221AA4D161 298 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 GOLGA6L10A6NI86 522 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 HSPB2A8KAH6 182 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 A8MT66 165 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 AHRRA9YTQ3 701 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 KDM4EB2RXH2 506 aaPredicted RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 SYT5O00445 386 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 PPP6CO00743 305 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CTAG2O75638 210 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 KRT38O76015 456 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ZWINTO95229 277 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 EPPINO95925 133 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 OTCP00480 354 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ABCB1P08183 1280 aaPredicted RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 NAGAP17050 411 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 NT5EP21589 574 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CNTFP26441 200 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 DNAJA1P31689 397 aaKnown RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CEACAM8P31997 349 aaPredicted RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TIMP3P35625 211 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MAP4K2Q12851 820 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 HSPB2Q16082 182 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 WHAMMP3Q1A5X7 153 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 FBXL19-AS1Q494R0 122 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 C6orf163Q5TEZ5 329 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 HLA-DQA1Q5Y7H0 255 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TTC19Q6DKK2 380 aaPredicted RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 VASNQ6EMK4 673 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TMEM81Q6P7N7 255 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ARSKQ6UWY0 536 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 RPS27LQ71UM5 84 aaKnown RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 WDR53Q7Z5U6 358 aaPredicted RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MILR1Q7Z6M3 343 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 LACC1Q8IV20 430 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MMGT1Q8N4V1 131 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 NOA1Q8NC60 698 aaKnown RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TNIP2Q8NFZ5 429 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CTHRC1Q96CG8 243 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TMEM41AQ96HV5 264 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 GNRHR2Q96P88 292 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 FMO2Q99518 471 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MDFIQ99750 246 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 SH3GL2Q99962 352 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 NXF5Q9H1B4 397 aaKnown RBP8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 MAT2BQ9NZL9 334 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ZNF225Q9UK10 706 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 SLC12A4Q9UP95 1085 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 FREM3P0C091 2139 aa8.6□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CD8B2A6NJW9 211 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ADARB2-AS1A8MUL3 147 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TRIM49D1C9J1S8 452 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 DVL2O14641 736 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 ACOX3O15254 700 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CDH16O75309 829 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 GUCY1B2O75343 617 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 PPM1BO75688 479 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 TRAPPC6AO75865 159 aa8.59□□□□□ -1.03
CDC42-IT1-201ENST00000431803 CBX7O95931 251 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms