RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 DTD2Q96FN9 168 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 COQ7Q99807 217 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 TTYH2Q9BSA4 534 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 ST6GALNAC5Q9BVH7 336 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 CARD9Q9H257 536 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 COG4Q9H9E3 785 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 SYTL2Q9HCH5 934 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 TIGARQ9NQ88 270 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 EXOSC3Q9NQT5 275 aaKnown RBP1.68□□□□□ -2.14
CDC40-204ENST00000431461 RBM28Q9NW13 759 aaKnown RBP1.68□□□□□ -2.14
CDC40-204ENST00000431461 CWC25Q9NXE8 425 aaPredicted RBP1.68□□□□□ -2.14
CDC40-204ENST00000431461 MLXQ9UH92 298 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 PRO0461Q9UI25 63 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 IKZF3Q9UKT9 509 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 DNPEPQ9ULA0 475 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 TP53TG3Q9ULZ0 132 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 RNF24Q9Y225 148 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 NTNG1Q9Y2I2 539 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 ZNF175Q9Y473 711 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 KIF3AQ9Y496 699 aa1.68□□□□□ -2.14
CDC40-204ENST00000431461 DHX29Q7Z478 1369 aaKnown RBP1.68□□□□□ -2.14
CDC40-204ENST00000431461 UBE4BO95155 1302 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 A0A0J9YVX5 310 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 MFSD2BA6NFX1 497 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 FBLL1A6NHQ2 334 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 SRRM4A7MD48 611 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 A8MU10 97 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 SHISA9B4DS77 424 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 LCMT2O60294 686 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 NME6O75414 186 aaPredicted RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 STK17BO94768 372 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 REC8O95072 547 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 GJB5O95377 273 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 ANP32DO95626 131 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 ECDO95905 644 aaPredicted RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 MELTFP08582 738 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 CCDC159P0C7I6 412 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 DNAH10OSP0CZ25 163 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 BCKDHAP12694 445 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 FOLR2P14207 255 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 PVRP15151 417 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 UCP1P25874 307 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 MAPK3P27361 379 aaPredicted RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 PTPN6P29350 595 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 SFNP31947 248 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 ID1P41134 155 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 MTIF2P46199 727 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 NPY2RP49146 381 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 STK19P49842 368 aaPredicted RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 CCL11P51671 97 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 NAPAP54920 295 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 VCPP55072 806 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 RPS4XP62701 263 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 CRMP1Q14194 572 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 PDIA5Q14554 519 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 LTB4RQ15722 352 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 CD226Q15762 336 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 INAQ16352 499 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 CCL14Q16627 93 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 PPP1R3AQ16821 1122 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 ZSWIM7Q19AV6 140 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 C17orf58Q2M2W7 97 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 TCTEX1D4Q5JR98 221 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 NHLRC3Q5JS37 347 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 UTF1Q5T230 341 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 ATAD3CQ5T2N8 411 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 MARC1Q5VT66 337 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 PRAMEF7Q5VXH5 474 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 ZNF774Q6NX45 483 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 LEG1Q6P5S2 330 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 CNSTQ6PJW8 725 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 VITQ6UXI7 678 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 LRRC70Q7Z2Q7 622 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 HIPK1Q86Z02 1210 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 CCDC71Q8IV32 467 aaPredicted RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 HSCBQ8IWL3 235 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 SLC22A18ASQ8N1D0 253 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 CCNYQ8ND76 341 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 MGARPQ8TDB4 240 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 RNASE8Q8TDE3 154 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 GIPC3Q8TF64 312 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 ITLN1Q8WWA0 313 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 IL1F10Q8WWZ1 152 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 CRYGNQ8WXF5 182 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 PHYHIPQ92561 330 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 CCDC51Q96ER9 411 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 VPS39Q96JC1 886 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 ACCSQ96QU6 501 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 OR5M11Q96RB7 305 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 GPA33Q99795 319 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 SLC30A2Q9BRI3 323 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 C1orf21Q9H246 121 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 LIME1Q9H400 295 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 TSPY26PQ9H489 355 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 RNF41Q9H4P4 317 aaPredicted RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 TMEM231Q9H6L2 316 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 SLC25A19Q9HC21 320 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 PRR34Q9NV39 138 aa1.67□□□□□ -2.14
CDC40-204ENST00000431461 FAM120CQ9NX05 1096 aaKnown RBP1.67□□□□□ -2.14
CDC40-204ENST00000431461 MIOXQ9UGB7 285 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms