RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 UQCC2Q9BRT2 126 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 ST6GALNAC4Q9H4F1 302 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 A4GALTQ9NPC4 353 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF446Q9NWS9 450 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 PSD3Q9NYI0 1048 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 IL37Q9NZH6 218 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 EXOC7Q9UPT5 735 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 EXO1Q9UQ84 846 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 NOSIPQ9Y314 301 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 SPTBN1Q01082 2364 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 PLXNA2O75051 1894 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 TLN1Q9Y490 2541 aaKnown RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 ICE1Q9Y2F5 2266 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 A0A087WUV0 522 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 A0A1W2PN81 502 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 FAM92AA1XBS5 289 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 NEMP2A6NFY4 417 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 FAM47DPA6NHR8 397 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 NDUFAB1O14561 156 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 KLF11O14901 512 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 LSM1O15116 133 aaKnown RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 P4HA2O15460 535 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 TTI1O43156 1089 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 AHCYL1O43865 530 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 CSO75390 466 aaKnown RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 CTDNEP1O95476 244 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 SCGB1D1O95968 90 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 TNNC2P02585 160 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 IGHV4-34P06331 123 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATP5BP06576 529 aaKnown RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZDHHC11BP0C7U3 371 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 KRT13P13646 458 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 CA4P22748 312 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATP5DP30049 168 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 CHRNA7P36544 502 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 HSD17B7P56937 341 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 RIPPLY3P57055 190 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 PNRC1Q12796 327 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 BNIP1Q12981 228 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 SGSM1Q2NKQ1 1148 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 SNAI3Q3KNW1 292 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 LINC00303Q3SY05 128 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF776Q68DI1 518 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 CAVIN1Q6NZI2 390 aaKnown RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 SLC39A4Q6P5W5 647 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 DOK6Q6PKX4 331 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 PRPF39Q86UA1 669 aaKnown RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 IQCHQ86VS3 1027 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 P2RY8Q86VZ1 359 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 RAB42Q8N4Z0 105 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 C4orf32Q8N8J7 132 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF557Q8N988 423 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 PPFIBP2Q8ND30 876 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 OR2T34Q8NGX1 318 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 DDI1Q8WTU0 396 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 SGF29Q96ES7 293 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 CALML4Q96GE6 196 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 SMARCD1Q96GM5 515 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 PKP2Q99959 881 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 FAM213AQ9BRX8 229 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 CENPOQ9BU64 300 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 CLEC7AQ9BXN2 247 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 VN1R1Q9GZP7 353 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 ASCL3Q9NQ33 180 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 BATF3Q9NR55 127 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 KRT84Q9NSB2 600 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 FBXL12Q9NXK8 326 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 TAB2Q9NYJ8 693 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 RBAKQ9NYW8 714 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 RHCGQ9UBD6 479 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 OSGIN1Q9UJX0 560 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 SLCO1B1Q9Y6L6 691 aa4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 USP9YO00507 2555 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P5-201ENST00000428894 ABCA12Q86UK0 2595 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 NBASA2RRP1 2371 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ARPC4-TTLL3A0A0A6YYG9 625 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 TRIM64A6NGJ6 449 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 TRIM64BA6NI03 449 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 A8MXQ7 604 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ANKRD63C9JTQ0 380 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 TMX2-CTNND1H3BSU7 103 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 M0QX08 132 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 POLR3GO15318 223 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 SSX4O60224 188 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 PENKP01210 267 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 THEGLP0DJG4 465 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 RALAP11233 206 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 GATA1P15976 413 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATP6V1E1P36543 226 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 SUOXP51687 545 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ST8SIA6P61647 398 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 RPS14P62263 151 aaKnown RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 TNNC1P63316 161 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 CTAG1AP78358 180 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 CX3CL1P78423 397 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 DYNC1I2Q13409 638 aaKnown RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF239Q16600 458 aaKnown RBP4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 ISXQ2M1V0 245 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 MPPE1Q53F39 396 aa4.12□□□□□ -1.75
HMGB3P5-201ENST00000428894 TMCO3Q6UWJ1 677 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms