RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 ZNF639Q9UID6 485 aa9.4□□□□□ -0.9
ZNF3-208ENST00000428683 UTS2RQ9UKP6 389 aa9.4□□□□□ -0.9
ZNF3-208ENST00000428683 CFL2Q9Y281 166 aa9.4□□□□□ -0.9
ZNF3-208ENST00000428683 DLGAP4Q9Y2H0 992 aa9.4□□□□□ -0.9
ZNF3-208ENST00000428683 C15orf41Q9Y2V0 281 aa9.4□□□□□ -0.9
ZNF3-208ENST00000428683 PLLPQ9Y342 182 aa9.4□□□□□ -0.9
ZNF3-208ENST00000428683 TIMM22Q9Y584 194 aa9.4□□□□□ -0.9
ZNF3-208ENST00000428683 NINQ8N4C6 2090 aa9.4□□□□□ -0.91
ZNF3-208ENST00000428683 ICOSLGO75144 302 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 ULK1O75385 1050 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 REM1O75628 298 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 CBX7O95931 251 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 IL2RAP01589 272 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 KRT6AP02538 564 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 KRT6BP04259 564 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 ATP1B1P05026 303 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 IL3P08700 152 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 PCSK2P16519 638 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 NAGAP17050 411 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 IMPDH1P20839 514 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 PTPN6P29350 595 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 KIR2DL3P43628 341 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 KRT6CP48668 564 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 HTR6P50406 440 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 NAGLUP54802 743 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 HMGCS1Q01581 520 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 PLCXD2Q0VAA5 305 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 ACSF3Q4G176 576 aaPredicted RBP9.39□□□□□ -0.91
ZNF3-208ENST00000428683 VASNQ6EMK4 673 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 TIFABQ6ZNK6 161 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 RELL2Q8NC24 303 aaPredicted RBP9.39□□□□□ -0.91
ZNF3-208ENST00000428683 C17orf47Q8NEP4 570 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 KAT2AQ92830 837 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 HGDQ93099 445 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 ABTB1Q969K4 478 aaPredicted RBP9.39□□□□□ -0.91
ZNF3-208ENST00000428683 EXOSC8Q96B26 276 aaKnown RBP9.39□□□□□ -0.91
ZNF3-208ENST00000428683 HSPBAP1Q96EW2 488 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 APIPQ96GX9 242 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 TMEM41AQ96HV5 264 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 ZNF681Q96N22 645 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 TMEM237Q96Q45 408 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 UGT2B28Q9BY64 529 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 GALNT9Q9HCQ5 603 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 RYDENQ9NUL5 291 aaKnown RBP9.39□□□□□ -0.91
ZNF3-208ENST00000428683 DNAJB12Q9NXW2 375 aaKnown RBP9.39□□□□□ -0.91
ZNF3-208ENST00000428683 KLRF1Q9NZS2 232 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 TBK1Q9UHD2 729 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 MAPRE3Q9UPY8 281 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 L3MBTL1Q9Y468 752 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 PCDHGB3Q9Y5G1 929 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 CSMD2Q7Z408 3487 aa9.39□□□□□ -0.91
ZNF3-208ENST00000428683 INTS1Q8N201 2190 aaKnown RBP9.39□□□□□ -0.91
ZNF3-208ENST00000428683 GNG14A0A1W2PPG7 69 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 SYT5O00445 386 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 DVL2O14641 736 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 RIPK2O43353 540 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 PCDH7O60245 1069 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 UGT2B11O75310 529 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 FAM153BP0C7A2 387 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 RHOXF2BP0C7M4 288 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 DRD5P21918 477 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 ATP5F1P24539 256 aaPredicted RBP9.38□□□□□ -0.91
ZNF3-208ENST00000428683 DNAJA1P31689 397 aaKnown RBP9.38□□□□□ -0.91
ZNF3-208ENST00000428683 CEACAM8P31997 349 aaPredicted RBP9.38□□□□□ -0.91
ZNF3-208ENST00000428683 PTGDSP41222 190 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 PPICP45877 212 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 EMDP50402 254 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 ZNF136P52737 540 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 ART1P52961 327 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
ZNF3-208ENST00000428683 RAE1P78406 368 aaKnown RBP9.38□□□□□ -0.91
ZNF3-208ENST00000428683 SRYQ05066 204 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 SLC29A2Q14542 456 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 RASA2Q15283 850 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 FAM153CQ494X1 144 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 DCST1Q5T197 706 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 OR5M10Q6IEU7 315 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 SLC30A6Q6NXT4 461 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 GPRIN3Q6ZVF9 776 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 IFT20Q8IY31 132 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 PM20D2Q8IYS1 436 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 FAM83FQ8NEG4 500 aaPredicted RBP9.38□□□□□ -0.91
ZNF3-208ENST00000428683 OR9A2Q8NGT5 310 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 C16orf78Q8WTQ4 265 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 TMBIM1Q969X1 311 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 CTHRC1Q96CG8 243 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 MTBPQ96DY7 904 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 WDYHV1Q96HA8 205 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 KCNA7Q96RP8 456 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 RHOXF2Q9BQY4 288 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 OSBPL11Q9BXB4 747 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 EBPLQ9BY08 206 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 POLDIP3Q9BY77 421 aaKnown RBP9.38□□□□□ -0.91
ZNF3-208ENST00000428683 ACPTQ9BZG2 426 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 PRDM14Q9GZV8 571 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 LIME1Q9H400 295 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 SLC24A3Q9HC58 644 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 SERHLQ9NQF3 203 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 CRIM1Q9NZV1 1036 aa9.38□□□□□ -0.91
ZNF3-208ENST00000428683 PRODH2Q9UF12 536 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms