RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PIPOXQ9P0Z9 390 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 CLCA2Q9UQC9 943 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 FNDC3AQ9Y2H6 1198 aaKnown RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 PLXNB2O15031 1838 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 KCNE1BA0A087WTH5 132 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 MYBPHLA2RUH7 354 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 H3BN98 237 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 SGCEO43556 437 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 SUSD5O60279 629 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 GALR3O60755 368 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-206ENST00000428313 ITGA10O75578 1167 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 GJB3O75712 270 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 MTNR1BP49286 362 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 DGKEP52429 567 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 SCARB2Q14108 478 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 SFRP5Q5T4F7 317 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 GCNT6Q5T4J0 391 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 IDNKQ5T6J7 187 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 TMIEQ8NEW7 156 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 NANPQ8TBE9 248 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 DUSP26Q9BV47 211 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 ABCG8Q9H221 673 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF282Q9UDV7 671 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-206ENST00000428313 DPP7Q9UHL4 492 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 MAFFQ9ULX9 164 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 A0A0G2JPF8 293 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 AGAP14A8MT82 685 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 HMSDA8MTL9 139 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 HNRNPCL3B7ZW38 293 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 GPR182O15218 404 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 YY2O15391 372 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 STK16O75716 305 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 AQP8O94778 261 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 SOX14O95416 240 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 RLN2P04090 185 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 S100A8P05109 93 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 HNRNPCL4P0DMR1 293 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 LPOP22079 712 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-206ENST00000428313 RPS12P25398 132 aaKnown RBP15.22■□□□□ 0.03
C9orf3-206ENST00000428313 LHX1P48742 406 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 CCR6P51684 374 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 ERVK-25P63136 954 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 SHC2P98077 582 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 ACSM1Q08AH1 577 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 CCDC157Q569K6 752 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 METTL11BQ5VVY1 283 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 ALG1LQ6GMV1 187 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 C5orf46Q6UWT4 87 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 TMEM17Q86X19 198 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 DMBX1Q8NFW5 382 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 GTF3C2Q8WUA4 911 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-206ENST00000428313 TCEAL3Q969E4 200 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 ABHD1Q96SE0 405 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 ZYG11BQ9C0D3 744 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 SLC25A32Q9H2D1 315 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 RDH14Q9HBH5 336 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 NLGN3Q9NZ94 848 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 PCOLCE2Q9UKZ9 415 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 SLC9A8Q9Y2E8 581 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 GREB1Q4ZG55 1949 aa15.22■□□□□ 0.03
C9orf3-206ENST00000428313 IQCF5A8MTL0 148 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 TLX2O43763 284 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 EFCAB14O75071 495 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 MOCS2O96007 188 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 IFNW1P05000 195 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 SRPRAP08240 638 aaKnown RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 ACAA1P09110 424 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 LAMP1P11279 417 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 AKAP5P24588 427 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 GAB1Q13480 694 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 DYRK1AQ13627 763 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF235Q14590 738 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 CHRNA6Q15825 494 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 Q3ZCU0 254 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 ANXA8L1Q5VT79 327 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 NCEH1Q6PIU2 408 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 IKBIPQ70UQ0 350 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 TMUB2Q71RG4 321 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 C12orf45Q8N5I9 185 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 FGF11Q92914 225 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 PAWRQ96IZ0 340 aaKnown RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 UROC1Q96N76 676 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 DMRTA2Q96SC8 542 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 PDCD10Q9BUL8 212 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 APOL5Q9BWW9 433 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 C20orf85Q9H1P6 137 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 TMEM38AQ9H6F2 299 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 DDX31Q9H8H2 851 aaKnown RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 HMX1Q9NP08 348 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 TVP23BQ9NYZ1 205 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 MED11Q9P086 117 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 FKBPLQ9UIM3 349 aa15.21■□□□□ 0.03
C9orf3-206ENST00000428313 TSR3Q9UJK0 312 aaKnown RBP15.21■□□□□ 0.03
C9orf3-206ENST00000428313 FAAHO00519 579 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 NBNO60934 754 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 EIF3GO75821 320 aaKnown RBP eCLIP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 IGFBP1P08833 259 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-206ENST00000428313 CPN1P15169 458 aa15.2■□□□□ 0.02
C9orf3-206ENST00000428313 ZXDBP98169 803 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms