RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 EMC8O43402 210 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 IL6P05231 212 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 TNFSF10P50591 281 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 HLCSP50747 726 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 POLR2JP52435 117 aaKnown RBP22.63■■□□□ 1.21
VEGFA-209ENST00000425836 OC90Q02509 493 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-209ENST00000425836 SQLEQ14534 574 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 FUNDC1Q8IVP5 155 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 TMEM156Q8N614 296 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 TEX19Q8NA77 164 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 OR52E6Q96RD3 313 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 TRIM4Q9C037 500 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 NXF5Q9H1B4 397 aaKnown RBP22.63■■□□□ 1.21
VEGFA-209ENST00000425836 FOLH1BQ9HBA9 442 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 C3orf14Q9HBI5 128 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 NEUROD4Q9HD90 331 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 SNX8Q9Y5X2 465 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 FAM234BA2RU67 622 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 ABCB1P08183 1280 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-209ENST00000425836 SOX3P41225 446 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 PPICP45877 212 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 CYB561P49447 251 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 KLRB1Q12918 225 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 NFATC3Q12968 1075 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 NUP43Q8NFH3 380 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 C10orf82Q8WW14 230 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 ASB15Q8WXK1 588 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 FAM120BQ96EK7 910 aaKnown RBP22.63■■□□□ 1.21
VEGFA-209ENST00000425836 SIGLEC12Q96PQ1 595 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.63■■□□□ 1.213e-8■■□□□ 12.3
VEGFA-209ENST00000425836 B3GNT3Q9Y2A9 372 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 GPR55Q9Y2T6 319 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-209ENST00000425836 CROCCQ5TZA2 2017 aa22.63■■□□□ 1.21
VEGFA-209ENST00000425836 OR6B1O95007 311 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 DRD4P21917 467 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 DRD5P21918 477 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 CASRP41180 1078 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 PRKAG1P54619 331 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 DCAF7P61962 342 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 TLR1Q15399 786 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 OR1C1Q15619 314 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 NNATQ16517 81 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 SLC6A19Q695T7 634 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 SPINK14Q6IE38 97 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 LYPD8Q6UX82 237 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 TMEM64Q6YI46 380 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 ZNF227Q86WZ6 799 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 SLC15A4Q8N697 577 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 OR4A15Q8NGL6 344 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 SLC22A8Q8TCC7 542 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 LCORQ96JN0 433 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-209ENST00000425836 CCDC115Q96NT0 180 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 BTBD9Q96Q07 612 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 LRFN1Q9P244 771 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 BTNL2Q9UIR0 455 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 PCDHGB4Q9UN71 923 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 BSNQ9UPA5 3926 aa22.62■■□□□ 1.21
VEGFA-209ENST00000425836 TNRC6AQ8NDV7 1962 aaKnown RBP22.61■■□□□ 1.21
VEGFA-209ENST00000425836 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 NEURL1O76050 574 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 CPSF4O95639 269 aaKnown RBP22.61■■□□□ 1.21
VEGFA-209ENST00000425836 CCT3P49368 545 aaKnown RBP22.61■■□□□ 1.21
VEGFA-209ENST00000425836 PRR5P85299 388 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 PLEKHN1Q494U1 663 aaPredicted RBP22.61■■□□□ 1.21
VEGFA-209ENST00000425836 COLEC12Q5KU26 742 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 OPN5Q6U736 354 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 IL20RBQ6UXL0 311 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 SZRD1Q7Z422 152 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 TAGAPQ8N103 731 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 MDS2Q8NDY4 140 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 PNPLA2Q96AD5 504 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 GIMAP5Q96F15 307 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 ELAC2Q9BQ52 826 aaKnown RBP22.61■■□□□ 1.21
VEGFA-209ENST00000425836 FAM107BQ9H098 131 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 ZCCHC3Q9NUD5 404 aaKnown RBP22.61■■□□□ 1.21
VEGFA-209ENST00000425836 TMEM45AQ9NWC5 275 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 ZFYVE26Q68DK2 2539 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 IGSF10Q6WRI0 2623 aa22.61■■□□□ 1.21
VEGFA-209ENST00000425836 FRG2CA6NGY1 282 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 ERN1O75460 977 aaKnown RBP22.6■■□□□ 1.21
VEGFA-209ENST00000425836 PRB1P04280 392 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 CT45A8P0DMV1 189 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 CT45A9P0DMV2 189 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 CD1EP15812 388 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 CORO7P57737 925 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 ZNF155Q12901 538 aaPredicted RBP22.6■■□□□ 1.21
VEGFA-209ENST00000425836 CT45A2Q5DJT8 189 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 NPSR1Q6W5P4 371 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 GPALPP1Q8IXQ4 340 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 CPSF7Q8N684 471 aaKnown RBP22.6■■□□□ 1.21
VEGFA-209ENST00000425836 VPS33AQ96AX1 596 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 MS4A4EQ96PG1 132 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 RABEP2Q9H5N1 569 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 EQTNQ9NQ60 294 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 CCDC167Q9P0B6 97 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 BOD1L1Q8NFC6 3051 aa22.6■■□□□ 1.21
VEGFA-209ENST00000425836 TRAV17A0A0B4J275 112 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 A8MVJ9 347 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 PSG6Q00889 435 aa22.59■■□□□ 1.21
VEGFA-209ENST00000425836 RCAN2Q14206 197 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms