RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 EMDP50402 254 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 WDR4P57081 412 aaKnown RBP20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FBXW4P57775 412 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 STX3Q13277 289 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 RPS6KA2Q15349 733 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 C4orf17Q53FE4 359 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 C1QL3Q5VWW1 255 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 GHDCQ8N2G8 530 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FNDC5Q8NAU1 212 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 OR7G2Q8NG99 324 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SSC4DQ8WTU2 575 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PPCDCQ96CD2 204 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 MAGED4Q96JG8 741 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 LCORQ96JN0 433 aaPredicted RBP20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PPP1R36Q96LQ0 422 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TTTY12Q9BZ98 90 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 GLIPR2Q9H4G4 154 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 REEP4Q9H6H4 257 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 NKIRAS1Q9NYS0 192 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CHCHD2Q9Y6H1 151 aaPredicted RBP20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FREM3P0C091 2139 aa20.56■□□□□ 0.88
PTCHD3P2-201ENST00000424937 LRRTM2O43300 516 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PLOD3O60568 738 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 NME6O75414 186 aaPredicted RBP20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 STSP08842 583 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 RNF224P0DH78 156 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ABCD3P28288 659 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 MC3RP41968 323 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 HSF1Q00613 529 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 BST1Q10588 318 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 C6orf136Q5SQH8 315 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TMEM107Q6UX40 140 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FBXW8Q8N3Y1 598 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 LIX1Q8N485 282 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ZNF764Q96H86 408 aaPredicted RBP20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 AMDHD1Q96NU7 426 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 COL12A1Q99715 3063 aa20.55■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TRGV8A0A0C4DH27 118 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TP53I11O14683 189 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CDC40O60508 579 aaKnown RBP eCLIP20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 HPCAL1P37235 193 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 RPL14P50914 215 aaKnown RBP20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PPIAP62937 165 aaKnown RBP20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 KCNJ2P63252 427 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PLCXD2Q0VAA5 305 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ZNF155Q12901 538 aaPredicted RBP20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ZNF385BQ569K4 471 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CMPK2Q5EBM0 449 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 AGBL2Q5U5Z8 902 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SLC22A16Q86VW1 577 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 DIO2Q92813 273 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CIDECQ96AQ7 238 aaPredicted RBP20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 OMA1Q96E52 524 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 HSPBAP1Q96EW2 488 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ARGLU1Q9NWB6 273 aaPredicted RBP20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TUBA8Q9NY65 449 aaPredicted RBP20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CNIH4Q9P003 139 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SH3BP4Q9P0V3 963 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SH3BGRL2Q9UJC5 107 aa20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CNOT11Q9UKZ1 510 aaKnown RBP20.54■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SPTBN1Q01082 2364 aaKnown RBP20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ASH1LQ9NR48 2969 aaKnown RBP20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FRG2CA6NGY1 282 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ACOX3O15254 700 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ZNHIT1O43257 154 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SLC19A2O60779 497 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 COQ9O75208 318 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SLITRK5O94991 958 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PPICP45877 212 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 DCAF7P61962 342 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 HSPB3Q12988 150 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PDE7AQ13946 482 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 BNC2Q6ZN30 1099 aaPredicted RBP20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FJX1Q86VR8 437 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 KIRREL3Q8IZU9 778 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 OR52N2Q8NGI0 321 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ARL8AQ96BM9 186 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 VSTM2LQ96N03 204 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 IL1RL2Q9HB29 575 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FOLH1BQ9HBA9 442 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 DDX18Q9NVP1 670 aaKnown RBP20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ICE1Q9Y2F5 2266 aa20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SPTAN1Q13813 2472 aaKnown RBP20.53■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TBX19O60806 448 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ERN1O75460 977 aaKnown RBP20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PPM1BO75688 479 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 LDLRP01130 860 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ABOP16442 354 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 DRD5P21918 477 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SLC18A1P54219 525 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 CORO7P57737 925 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 FOXO1Q12778 655 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 PTGR1Q14914 329 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 IL23RQ5VWK5 629 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 BICRALQ6AI39 1079 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 ZNF551Q7Z340 670 aaPredicted RBP20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 R3HCC1LQ7Z5L2 792 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms