RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 OR2B3O76000 313 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 IFNA14P01570 189 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 HSD3B1P14060 373 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 CPN2P22792 545 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 HSD3B2P26439 372 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 ERP29P30040 261 aaKnown RBP13.54□□□□□ -0.24
MSH5-206ENST00000423982 AVPR1BP47901 424 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 LRRC32Q14392 662 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 MPP7Q5T2T1 576 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 TYW3Q6IPR3 259 aaKnown RBP13.54□□□□□ -0.24
MSH5-206ENST00000423982 Q6ZVU0 165 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 TCTE3Q8IZS6 198 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 SMRP1Q8NCR6 262 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 ZNF480Q8WV37 535 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 ECHDC3Q96DC8 303 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 SENP5Q96HI0 755 aaPredicted RBP13.54□□□□□ -0.24
MSH5-206ENST00000423982 MED30Q96HR3 178 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 GON7Q9BXV9 100 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 SEMA3GQ9NS98 782 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 ENOPH1Q9UHY7 261 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 MAPRE3Q9UPY8 281 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 SLC9A3R1O14745 358 aaPredicted RBP13.54□□□□□ -0.24
MSH5-206ENST00000423982 SEC14L5O43304 696 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 CPEP16870 476 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 DGKGP49619 791 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 CTBP2P56545 445 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 ALDH6A1Q02252 535 aaKnown RBP13.54□□□□□ -0.24
MSH5-206ENST00000423982 PDE7AQ13946 482 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 IL18Q14116 193 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 GINS1Q14691 196 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 TRIQKQ629K1 86 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 FAM71E1Q6IPT2 247 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 ZNF730Q6ZMV8 503 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 LAPTM4BQ86VI4 370 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 RASGRP3Q8IV61 690 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 PEX5LQ8IYB4 626 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 CLDN22Q8N7P3 220 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 C19orf18Q8NEA5 215 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 TMEM159Q96B96 161 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 RIOK2Q9BVS4 552 aaKnown RBP13.54□□□□□ -0.24
MSH5-206ENST00000423982 PRR14Q9BWN1 585 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 PLA2G12AQ9BZM1 189 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 ANKRA2Q9H9E1 313 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 DMRT3Q9NQL9 472 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 TEKT2Q9UIF3 430 aa13.54□□□□□ -0.24
MSH5-206ENST00000423982 FAM240BA0A1B0GVZ2 78 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 C5orf58C9J3I9 102 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 ADH1CP00326 375 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 H1F0P07305 194 aaKnown RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 PCSK2P16519 638 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 HLA-DMAP28067 261 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 IFNA8P32881 189 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 WSCD2Q2TBF2 565 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 LHFPL3Q86UP9 236 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 CACUL1Q86Y37 369 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 RASGEF1AQ8N9B8 481 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 OR56A3Q8NH54 315 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 NXPE3Q969Y0 559 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 ZNF582Q96NG8 517 aaPredicted RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 ZNF717Q9BY31 904 aaPredicted RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 TRIM45Q9H8W5 580 aaPredicted RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 GULP1Q9UBP9 304 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 SF3B6Q9Y3B4 125 aaKnown RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 KCNE2Q9Y6J6 123 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 LOC105371267A0A1B0GV96 52 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 A0A1B0GVC2 190 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 A6NIN4 97 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 WASHC1A8K0Z3 465 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 CASKO14936 926 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 SH3BP5O60239 455 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 SCO1O75880 301 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 RAB36O95755 333 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 NPPBP16860 134 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 DDX5P17844 614 aaKnown RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 AGFG1P52594 562 aaKnown RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 SNRPD1P62314 119 aaKnown RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 C19orf57Q0VDD7 668 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 HSPB3Q12988 150 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 WDR45BQ5MNZ6 344 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 C22orf39Q6P5X5 142 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 ADIPOR2Q86V24 386 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 AMIGO1Q86WK6 493 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 HOMEZQ8IX15 550 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 FAM109AQ8N4B1 249 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 UCN3Q969E3 161 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 MAGEB10Q96LZ2 347 aaPredicted RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 FAM83CQ9BQN1 747 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 WACQ9BTA9 647 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 EGLN3Q9H6Z9 239 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 PPP1R3EQ9H7J1 279 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 MIEF1Q9NQG6 463 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 TESQ9UGI8 421 aaKnown RBP13.53□□□□□ -0.24
MSH5-206ENST00000423982 NDOR1Q9UHB4 597 aa13.53□□□□□ -0.24
MSH5-206ENST00000423982 PIPSLA2A3N6 862 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 ARRDC5A6NEK1 342 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 ISM1B1AKI9 464 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 ANHXE9PGG2 379 aa13.52□□□□□ -0.24
MSH5-206ENST00000423982 GTPBP1O00178 669 aaKnown RBP13.52□□□□□ -0.24
MSH5-206ENST00000423982 LYRM1O43325 122 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms