RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PSMB4P28070 264 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 PCBD1P61457 104 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 TUBA1BP68363 451 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 LSM11P83369 360 aaKnown RBP eCLIP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 TLE3Q04726 772 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RPA4Q13156 261 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 OLIG2Q13516 323 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF750Q32MQ0 723 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 PGS1Q32NB8 556 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 PROX2Q3B8N5 592 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RFTN2Q52LD8 501 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 C1QTNF12Q5T7M4 302 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 SLC27A4Q6P1M0 643 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 MED27Q6P2C8 311 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 TUBA1AQ71U36 451 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 POLNQ7Z5Q5 900 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 GALNT5Q7Z7M9 940 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 TRIM74Q86UV6 250 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 TRIM73Q86UV7 250 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 CRLF3Q8IUI8 442 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 NOA1Q8NC60 698 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 C22orf15Q8WYQ4 148 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RBPMSQ93062 196 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 SLC25A36Q96CQ1 311 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 PEX11GQ96HA9 241 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ZBTB45Q96K62 511 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 SLC46A1Q96NT5 459 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 B3GNT4Q9C0J1 378 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 CALHM2Q9HA72 323 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ETNK1Q9HBU6 452 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RYDENQ9NUL5 291 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ONECUT1Q9UBC0 465 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 CRNNQ9UBG3 495 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 PAIP2BQ9ULR5 123 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 LAMP3Q9UQV4 416 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RBMX2Q9Y388 322 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RNF115Q9Y4L5 304 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ZDBF2Q9HCK1 2354 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 SDK1Q7Z5N4 2213 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 EPOPA6NHQ4 379 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ANKRD30BLA7E2S9 258 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 KDELR3O43731 214 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 YES1P07947 543 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 CELA3BP08861 270 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 LRPAP1P30533 357 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 NR2C2P49116 596 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 FMO5P49326 533 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 SRP9P49458 86 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 GTF2BQ00403 316 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 E2F2Q14209 437 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ATP6AP1Q15904 470 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RBM20Q5T481 1227 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 PLD3Q8IV08 490 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 TBC1D21Q8IYX1 336 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RBM15BQ8NDT2 890 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 PHOSPHO1Q8TCT1 267 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RGMAQ96B86 450 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 NAPGQ99747 312 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM246Q9BRR3 403 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 SIKE1Q9BRV8 207 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 HOXD1Q9GZZ0 328 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 C12orf49Q9H741 205 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 PLA2G3Q9NZ20 509 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 CNIH4Q9P003 139 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 MTF2Q9Y483 593 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 NYNRINQ9P2P1 1898 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 DUXAA6NLW8 204 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 EMC8O43402 210 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 VNN1O95497 513 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FGGP02679 453 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 GGT1P19440 569 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 EDNRBP24530 442 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CRHR1P34998 444 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 AHRP35869 848 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 HSPA7P48741 367 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 LIMK2P53671 638 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CARD18P57730 90 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 MAPRE2Q15555 327 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 TAS1R1Q7RTX1 841 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 IQCF2Q8IXL9 164 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SETD6Q8TBK2 473 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 OR5P2Q8WZ92 322 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 HDAC10Q969S8 669 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FAM136AQ96C01 138 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 LGALS12Q96DT0 336 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 CCDC126Q96EE4 140 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PBKQ96KB5 322 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 DUSP9Q99956 384 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM43Q9BTV4 400 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 DHX33Q9H6R0 707 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FBXO8Q9NRD0 319 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF624Q9P2J8 865 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 WRAP73Q9P2S5 460 aaPredicted RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 SNX12Q9UMY4 172 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 HELZ2Q9BYK8 2649 aaKnown RBP3.33□□□□□ -1.88
TOP2A-201ENST00000423485 A0A1W2PRG6 482 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 POM121CA8CG34 1229 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 FADS2P1A8MWK0 482 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 IMPA2O14732 288 aa3.33□□□□□ -1.88
TOP2A-201ENST00000423485 PDCD5O14737 125 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms