RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZNF155Q12901 538 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 MAPRE2Q15555 327 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 SPDYE7PQ495Y7 208 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 B3GNTL1Q67FW5 361 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 TCTN3Q6NUS6 607 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 DNAJC14Q6Y2X3 702 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 SZRD1Q7Z422 152 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 TREML1Q86YW5 311 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 ZNF441Q8N8Z8 693 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 NUP43Q8NFH3 380 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 OR56A1Q8NGH5 318 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 OR5L2Q8NGL0 311 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 OR5AK3PQ8NH89 298 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 THAP3Q8WTV1 239 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 TTC9Q92623 222 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 GIMAP5Q96F15 307 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 VSTM2LQ96N03 204 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 MS4A4EQ96PG1 132 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 SLC25A23Q9BV35 468 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 ITPAQ9BY32 194 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 ZNF552Q9H707 407 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 FOLH1BQ9HBA9 442 aa15.75■□□□□ 0.11
COL7A1-202ENST00000422991 ZCCHC3Q9NUD5 404 aaKnown RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 PCDHGA9Q9Y5G4 932 aaKnown RBP15.75■□□□□ 0.11
COL7A1-202ENST00000422991 KALRNO60229 2985 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 RNF103-CHMP3A0A140T963 221 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 C2orf92A0A1B0GVN3 265 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 EIF4E1BA6NMX2 242 aaKnown RBP15.74■□□□□ 0.11
COL7A1-202ENST00000422991 ANGPT2O15123 496 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 MAN1A2O60476 641 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 NME6O75414 186 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-202ENST00000422991 HOXB9P17482 250 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-202ENST00000422991 UQCRC2P22695 453 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 TRPC1P48995 793 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 MLF1P58340 268 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 LINC00303Q3SY05 128 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 PAGE3Q5JUK9 113 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 C6orf10Q5SRN2 563 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 AGAP7PQ5VUJ5 663 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 RPS19BP1Q86WX3 136 aaKnown RBP15.74■□□□□ 0.11
COL7A1-202ENST00000422991 SNX32Q86XE0 403 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 C17orf47Q8NEP4 570 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 ADIPOR1Q96A54 375 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 WBP1Q96G27 269 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 ZNF354BQ96LW1 612 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 AGAP4Q96P64 663 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 BTBD9Q96Q07 612 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 PAIP1Q9H074 479 aaKnown RBP15.74■□□□□ 0.11
COL7A1-202ENST00000422991 SLC6A13Q9NSD5 602 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 MYOTQ9UBF9 498 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 TEKT2Q9UIF3 430 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 LEF1Q9UJU2 399 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-202ENST00000422991 VPS4AQ9UN37 437 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 EXPH5Q8NEV8 1989 aa15.74■□□□□ 0.11
COL7A1-202ENST00000422991 TLN1Q9Y490 2541 aaKnown RBP15.73■□□□□ 0.11
COL7A1-202ENST00000422991 TNRC6AQ8NDV7 1962 aaKnown RBP15.73■□□□□ 0.11
COL7A1-202ENST00000422991 A0A096LPI6 279 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 CAPN14A8MX76 684 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 MKRN2OSH3BPM6 223 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 FBP2O00757 339 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 GSNP06396 782 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 ZCCHC18P0CG32 403 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 PRKAG1P54619 331 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 TP53BP2Q13625 1128 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 MEP1AQ16819 746 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 ACER2Q5QJU3 275 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 LRIF1Q5T3J3 769 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 HLA-DQA1Q5Y7H0 255 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 MFSD12Q6NUT3 480 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 ISLR2Q6UXK2 745 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 C16orf47Q6ZP98 133 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-202ENST00000422991 RETREG3Q86VR2 466 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 CLEC4FQ8N1N0 589 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 DPP10Q8N608 796 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 TRIML2Q8N7C3 387 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 HOXB13Q92826 284 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-202ENST00000422991 LRRC37BQ96QE4 947 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 PHF12Q96QT6 1004 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 SMAD5Q99717 465 aaKnown RBP15.73■□□□□ 0.11
COL7A1-202ENST00000422991 SLC35A5Q9BS91 424 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 CDCP1Q9H5V8 836 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 EPS8L2Q9H6S3 715 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 LIN28AQ9H9Z2 209 aaKnown RBP15.73■□□□□ 0.11
COL7A1-202ENST00000422991 EQTNQ9NQ60 294 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 GPATCH2Q9NW75 528 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 NDUFAF1Q9Y375 327 aa15.73■□□□□ 0.11
COL7A1-202ENST00000422991 BOD1L1Q8NFC6 3051 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 BBIP1A8MTZ0 92 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 WWP2O00308 870 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 ERN1O75460 977 aaKnown RBP15.72■□□□□ 0.11
COL7A1-202ENST00000422991 OR2J2O76002 312 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 NADKO95544 446 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-202ENST00000422991 ALPPP05187 535 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 HMGN2P05204 90 aaKnown RBP15.72■□□□□ 0.11
COL7A1-202ENST00000422991 COX4I1P13073 169 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 MAP3K8P41279 467 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 PPICP45877 212 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 CORO7P57737 925 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 DCAF7P61962 342 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 KCNAB2Q13303 367 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms