RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 TMEM121BQ9BXQ6 578 aaPredicted RBP13.76□□□□□ -0.21
CHRD-204ENST00000420973 MED28Q9H204 178 aa13.76□□□□□ -0.21
CHRD-204ENST00000420973 COA4Q9NYJ1 87 aa13.76□□□□□ -0.21
CHRD-204ENST00000420973 KIAA0513O60268 411 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 EBLN1P0CF75 366 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 KIR2DL3P43628 341 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 STARP49675 285 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 MC1RQ01726 317 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 XKR7Q5GH72 579 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 C1orf53Q5VUE5 145 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 COQ8AQ8NI60 647 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 MAL2Q969L2 176 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 ECHDC3Q96DC8 303 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 QRFPRQ96P65 431 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 CPEB1Q9BZB8 566 aaKnown RBP13.75□□□□□ -0.21
CHRD-204ENST00000420973 C8orf33Q9H7E9 229 aaPredicted RBP13.75□□□□□ -0.21
CHRD-204ENST00000420973 DYRK1BQ9Y463 629 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 TCRBV16S1A1N1A0A5B0 115 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 C8GP07360 202 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 KIR3DL1P43629 444 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 RAB13P51153 203 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 CLCNKAP51800 687 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 FGL1Q08830 312 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 CLLU1Q5K131 121 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 PDE12Q6L8Q7 609 aaKnown RBP13.75□□□□□ -0.21
CHRD-204ENST00000420973 SSX9Q7RTT3 188 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 B3GNT8Q7Z7M8 397 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 AHCYL2Q96HN2 611 aaKnown RBP13.75□□□□□ -0.21
CHRD-204ENST00000420973 CCM2Q9BSQ5 444 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 LGR4Q9BXB1 951 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 CLDND1Q9NY35 253 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 ACSL6Q9UKU0 697 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 SLC6A14Q9UN76 642 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 PCDHB14Q9Y5E9 798 aa13.75□□□□□ -0.21
CHRD-204ENST00000420973 A0A1B0GV90 55 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 FEZF1A0PJY2 475 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SLC22A23A1A5C7 686 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 FABP12A6NFH5 140 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 CLDN24A6NM45 220 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 GFRA2O00451 464 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 MITFO75030 526 aaPredicted RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 ALPPL2P10696 532 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 TBPL1P62380 186 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 FAM217AQ8IXS0 508 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SETD9Q8NE22 299 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 NR4A3Q92570 626 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 MCCC1Q96RQ3 725 aaPredicted RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 SLC12A9Q9BXP2 914 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SNTG1Q9NSN8 517 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 STOX2Q9P2F5 926 aaPredicted RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 FAM74A7A6NL05 159 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 PCDHGA12O60330 932 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 RLN2P04090 185 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 ZNF8P17098 575 aaPredicted RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 CRATP43155 626 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 RRAS2P62070 204 aaPredicted RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 SSX2Q16385 188 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 FAM74A3Q4VXF1 159 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 C4orf46Q504U0 113 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SLC6A19Q695T7 634 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 TIGD3Q6B0B8 471 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 NOXRED1Q6NXP6 359 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 ATRAIDQ6UW56 229 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 LAX1Q8IWV1 398 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 CBARPQ8N350 705 aaPredicted RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 TMEM132CQ8N3T6 1108 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 OR6S1Q8NH40 331 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 ZDHHC12Q96GR4 267 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 CRELD1Q96HD1 420 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 RBM4BQ9BQ04 359 aaKnown RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 RBM4Q9BWF3 364 aaKnown RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 SHARPINQ9H0F6 387 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 CARS2Q9HA77 564 aaKnown RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 SERGEFQ9UGK8 458 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 TAC3Q9UHF0 121 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 FBXL2Q9UKC9 423 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SLC9A8Q9Y2E8 581 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 A0A096LPI6 279 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 TRBV5-4A0A0C4DH59 114 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 FPGTO14772 594 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SERPINA1P01009 418 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SDC1P18827 310 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 DDX6P26196 483 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHRD-204ENST00000420973 C21orf33P30042 268 aaPredicted RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 GJA4P35212 333 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 MMP12P39900 470 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 PDGFRLQ15198 375 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 UGT8Q16880 541 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 KLHL26Q53HC5 615 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 PARM1Q6UWI2 310 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 ISG20Q96AZ6 181 aaKnown RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 MRPL48Q96GC5 212 aaKnown RBP13.74□□□□□ -0.21
CHRD-204ENST00000420973 ASB16Q96NS5 453 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 CNPPD1Q9BV87 410 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 TEX12Q9BXU0 123 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 PLA2G2FQ9BZM2 168 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SMURF1Q9HCE7 757 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 UFSP2Q9NUQ7 469 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 ZIM2Q9NZV7 527 aa13.74□□□□□ -0.21
CHRD-204ENST00000420973 SH2B3Q9UQQ2 575 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms