RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZNF597Q96LX8 424 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 RILPQ96NA2 401 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 SECISBP2Q96T21 854 aaKnown RBP10.11□□□□□ -0.79
SSBP3-206ENST00000420121 BRINP2Q9C0B6 783 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 LDAHQ9H6V9 325 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 ANKRA2Q9H9E1 313 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 TNFRSF12AQ9NP84 129 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 SIRT5Q9NXA8 310 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 Q9UFV3 132 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 DLGAP4Q9Y2H0 992 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 PLLPQ9Y342 182 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 SPG11Q96JI7 2443 aa10.11□□□□□ -0.79
SSBP3-206ENST00000420121 GOLGA6L10A6NI86 522 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 TP53I11O14683 189 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 PCDH7O60245 1069 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 WDR1O75083 606 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 ULK1O75385 1050 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 NME6O75414 186 aaPredicted RBP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 PPM1BO75688 479 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 HPNP05981 417 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 ENO1P06733 434 aaKnown RBP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 PCSK2P16519 638 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 HMOX2P30519 316 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 TIA1P31483 386 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 TRPC1P48995 793 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 PKNOX1P55347 436 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 CRYZQ08257 329 aaKnown RBP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 C1orf185Q5T7R7 199 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 HLA-DQA1Q5Y7H0 255 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 SCIMPQ6UWF3 145 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 ZYG11AQ6WRX3 759 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 ULK2Q8IYT8 1036 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 GBP7Q8N8V2 638 aaPredicted RBP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 EIF1ADQ8N9N8 165 aaKnown RBP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 OR52R1Q8NGF1 315 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 ZNF675Q8TD23 568 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 C16orf78Q8WTQ4 265 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 TMEM41AQ96HV5 264 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 JSRP1Q96MG2 331 aaPredicted RBP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 NODALQ96S42 347 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 C12orf65Q9H3J6 166 aaKnown RBP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 L2HGDHQ9H9P8 463 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 NMRK1Q9NWW6 199 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 DCDC2Q9UHG0 476 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 UTS2RQ9UKP6 389 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 ACAD8Q9UKU7 415 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 PCDHGB3Q9Y5G1 929 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 ANKHD1Q8IWZ3 2542 aaKnown RBP10.1□□□□□ -0.79
SSBP3-206ENST00000420121 F8P00451 2351 aa10.1□□□□□ -0.79
SSBP3-206ENST00000420121 MED12LQ86YW9 2145 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 CAPN14A8MX76 684 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 B4DXG7 233 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 TO15178 435 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 PLIN3O60664 434 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 UGT2B11O75310 529 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 GLRA3O75311 464 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 SNX4O95219 450 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 DRD2P14416 443 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 NAGAP17050 411 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 GDF1P27539 372 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 PTPN6P29350 595 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 SSTR2P30874 369 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 DEKP35659 375 aaKnown RBP10.09□□□□□ -0.79
SSBP3-206ENST00000420121 PPICP45877 212 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 ALDH9A1P49189 494 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 TMED10P49755 219 aaKnown RBP10.09□□□□□ -0.79
SSBP3-206ENST00000420121 CDK9P50750 372 aaKnown RBP10.09□□□□□ -0.79
SSBP3-206ENST00000420121 DLX5P56178 289 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 SPIN4Q56A73 249 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 DCST1Q5T197 706 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 WLSQ5T9L3 541 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 TMEM198Q66K66 360 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 POMZP3Q6PJE2 187 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 NPSR1Q6W5P4 371 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 FRMD7Q6ZUT3 714 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 TDRPQ86YL5 185 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 DMRTC2Q8IXT2 367 aaPredicted RBP10.09□□□□□ -0.79
SSBP3-206ENST00000420121 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 NAXEQ8NCW5 288 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 OR9A2Q8NGT5 310 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 RNF138Q8WVD3 245 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 OMA1Q96E52 524 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 HSPBAP1Q96EW2 488 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 LCORQ96JN0 433 aaPredicted RBP10.09□□□□□ -0.79
SSBP3-206ENST00000420121 GNRHR2Q96P88 292 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 FAIM2Q9BWQ8 316 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 MID1IP1Q9NPA3 183 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 KCNJ16Q9NPI9 418 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 BCAP29Q9UHQ4 241 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 EXO1Q9UQ84 846 aaKnown RBP10.09□□□□□ -0.79
SSBP3-206ENST00000420121 GPR55Q9Y2T6 319 aaPredicted RBP10.09□□□□□ -0.79
SSBP3-206ENST00000420121 C15orf41Q9Y2V0 281 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 CCL27Q9Y4X3 112 aa10.09□□□□□ -0.79
SSBP3-206ENST00000420121 FRG2CA6NGY1 282 aa10.08□□□□□ -0.8
SSBP3-206ENST00000420121 ACOX3O15254 700 aa10.08□□□□□ -0.8
SSBP3-206ENST00000420121 HOXD4P09016 255 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-206ENST00000420121 CT45A8P0DMV1 189 aa10.08□□□□□ -0.8
SSBP3-206ENST00000420121 CT45A9P0DMV2 189 aa10.08□□□□□ -0.8
SSBP3-206ENST00000420121 GABRA1P14867 456 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms