RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 GPR137CQ8N3F9 429 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF564Q8TBZ8 553 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 VMP1Q96GC9 406 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 C19orf43Q9BQ61 176 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 NLNQ9BYT8 704 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 CIDEBQ9UHD4 219 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 MRPS2Q9Y399 296 aaKnown RBP3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 CHD4Q14839 1912 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 LRRK1Q38SD2 2015 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 A8MX80 341 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 PDE5AO76074 875 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 GOSR1O95249 250 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 NUDT14O95848 222 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 SERPINF2P08697 491 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 HMOX1P09601 288 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 CNN1P51911 297 aaKnown RBP3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 ERVPABLB-1P60509 514 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 CDKL1Q00532 357 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 WASHC5Q12768 1159 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 TTC31Q49AM3 519 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 ATRAIDQ6UW56 229 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 MFSD7Q6UXD7 560 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 STOX1Q6ZVD7 989 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 BNIPLQ7Z465 357 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF410Q86VK4 478 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 IQCA1Q86XH1 822 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 CNTN4Q8IWV2 1026 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 GPR65Q8IYL9 337 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 Q8N9G6 341 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 DTD2Q96FN9 168 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 B3GALT6Q96L58 329 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 CASD1Q96PB1 797 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 TRIM9Q9C026 710 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 TSPY26PQ9H489 355 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 STARD5Q9NSY2 213 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 AKAP7Q9P0M2 348 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 ISY1Q9ULR0 285 aaKnown RBP3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 TEX264Q9Y6I9 313 aa3.1□□□□□ -1.91
HMGB1P49-201ENST00000418882 SYNJ2O15056 1496 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 TRIM64A6NGJ6 449 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 TRIM64BA6NI03 449 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 EEF2KO00418 725 aaKnown RBP3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 CDX4O14627 284 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 GPAA1O43292 621 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 KINO60870 393 aaKnown RBP3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 SLC2A10O95528 541 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 SNRPCP09234 159 aaKnown RBP3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 CYP11B1P15538 503 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 PTPN4P29074 926 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 NPY2RP49146 381 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 CCL11P51671 97 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 RAG2P55895 527 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 NPRL3Q12980 569 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 MORF4L2Q15014 288 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 RSBN1Q5VWQ0 802 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 OLFML2AQ68BL7 652 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 VASH2Q86V25 355 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF677Q86XU0 584 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 CEND1Q8N111 149 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 FNDC8Q8TC99 324 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 LHX4Q969G2 390 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 SLCO4A1Q96BD0 722 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 SPATA13Q96N96 652 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 MAPKAP1Q9BPZ7 522 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 CARD9Q9H257 536 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 DBNDD1Q9H9R9 158 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 MIEF1Q9NQG6 463 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 NDUFA13Q9P0J0 144 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 VPS54Q9P1Q0 977 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF175Q9Y473 711 aa3.09□□□□□ -1.91
HMGB1P49-201ENST00000418882 TYROBPO43914 113 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 IGHDP01880 384 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 AREGP15514 252 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 FERP16591 822 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 CALRP27797 417 aaKnown RBP3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 NSFP46459 744 aaKnown RBP3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 ALDH3B2P48448 385 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 GALK2Q01415 458 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 ASAH1Q13510 395 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 ZIC1Q15915 447 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 QRICH1Q2TAL8 776 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 ZNF699Q32M78 642 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 DNAJC21Q5F1R6 531 aaKnown RBP3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 C2orf66Q6UXQ4 117 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 PYROXD2Q8N2H3 581 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 ARL10Q8N8L6 244 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 RFESDQ8TAC1 157 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 MGARPQ8TDB4 240 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 PHYHIPLQ96FC7 376 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 DEFB118Q96PH6 123 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 FAM213AQ9BRX8 229 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 APOOQ9BUR5 198 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 TMEM245Q9H330 911 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 ALG9Q9H6U8 611 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 SENP1Q9P0U3 644 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 ERVK-18Q9QC07 812 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 MIOXQ9UGB7 285 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 SLC2A6Q9UGQ3 507 aa3.08□□□□□ -1.92
HMGB1P49-201ENST00000418882 PLEKHA6Q9Y2H5 1048 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms