RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 IDNKQ5T6J7 187 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PGBD2Q6P3X8 592 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 B3GLCTQ6Y288 498 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 MON1AQ86VX9 555 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 OXR1Q8N573 874 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 GOT1L1Q8NHS2 421 aaPredicted RBP7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 PAAF1Q9BRP4 392 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC35A5Q9BS91 424 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 ACTR6Q9GZN1 396 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 SLAMF7Q9NQ25 335 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 COA4Q9NYJ1 87 aa7.59□□□□□ -1.19
HMGXB4-202ENST00000418170 C2orf92A0A1B0GVN3 265 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF593O00488 134 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 THP07101 528 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 AOAHP28039 575 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 RPS7P62081 194 aaKnown RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 HBA1P69905 142 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ACSM2AQ08AH3 577 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 TAF12Q16514 161 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ACSM2BQ68CK6 577 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 HBMQ6B0K9 141 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 PYHIN1Q6K0P9 492 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 METTL23Q86XA0 190 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CMIPQ8IY22 773 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 OR56B4Q8NH76 319 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 RPLP0P6Q8NHW5 317 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SCARB1Q8WTV0 552 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 GTF3C2Q8WUA4 911 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 EID2BQ96D98 161 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 RNFT2Q96EX2 444 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ELMOD3Q96FG2 381 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 C12orf66Q96MD2 445 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SEC22CQ9BRL7 303 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SPRTNQ9H040 489 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 TXNRD2Q9NNW7 524 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CLCA2Q9UQC9 943 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 KCNK7Q9Y2U2 307 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SOX30O94993 753 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CBX7O95931 251 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 HPXP02790 462 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 JUPP14923 745 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 NPR2P20594 1047 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 OPRD1P41143 372 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC6A12P48065 614 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 DGKGP49619 791 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CCR6P51684 374 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 KIAA1024LP59773 190 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 EFEMP1Q12805 493 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SP140Q13342 867 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 MPP7Q5T2T1 576 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ATXN7L2Q5T6C5 722 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 TRIM40Q6P9F5 258 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 TOMM5Q8N4H5 51 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF527Q8NB42 609 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 COQ8AQ8NI60 647 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SPATA5L1Q9BVQ7 753 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ASB6Q9NWX5 421 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CKAP5Q14008 2032 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 FRMPD3Q5JV73 1810 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 MTMR11A4FU01 709 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CASTOR2A6NHX0 329 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CD8B2A6NJW9 211 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 POM121CA8CG34 1229 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 L7N2F9 121 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SYN3O14994 580 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 PRODHO43272 600 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SEMA7AO75326 666 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SNAPC5O75971 98 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 NFATC1O95644 943 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 APOC1P02654 83 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 APOC3P02656 99 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ALDOBP05062 364 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ADRB1P08588 477 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 H2AFB1P0C5Y9 115 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ARAFP10398 606 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CD8BP10966 210 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 FOSL1P15407 271 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 CELP19835 753 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 GALP22466 123 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 LTB4RQ15722 352 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 C6orf132Q5T0Z8 1188 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 B3GNTL1Q67FW5 361 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 PLEKHH3Q7Z736 793 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SIAH3Q8IW03 269 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC30A8Q8IWU4 369 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 KCTD12Q96CX2 325 aaKnown RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC19A3Q9BZV2 496 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF275Q9NSD4 429 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SPATA6Q9NWH7 488 aaPredicted RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 NLGN3Q9NZ94 848 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 OR6C2Q9NZP2 312 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 PURGQ9UJV8 347 aaKnown RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 SCML2Q9UQR0 700 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 ANGPT4Q9Y264 503 aa7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 HELZP42694 1942 aaKnown RBP7.58□□□□□ -1.2
HMGXB4-202ENST00000418170 FAM74A7A6NL05 159 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ADM5C9JUS6 153 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 F11P03951 625 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ADCYAP1R1P41586 468 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MTNR1AP48039 350 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms