RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 OR4F21O95013 312 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 CBX7O95931 251 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 IL2RAP01589 272 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 SNRPAP09012 282 aaKnown RBP19.9■□□□□ 0.78
ACTB-203ENST00000417101 BMP7P18075 431 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 PTPN6P29350 595 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 ECHS1P30084 290 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 TIMP3P35625 211 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 SOX18P35713 384 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 PLCXD2Q0VAA5 305 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 LTB4RQ15722 352 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 DCST1Q5T197 706 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 NUP54Q7Z3B4 507 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 YRDCQ86U90 279 aaKnown RBP19.9■□□□□ 0.78
ACTB-203ENST00000417101 OR1J4Q8NGS1 313 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 RNASE6Q93091 150 aaKnown RBP19.9■□□□□ 0.78
ACTB-203ENST00000417101 HGDQ93099 445 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 OMA1Q96E52 524 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 HSPBAP1Q96EW2 488 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 LRRC46Q96FV0 321 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 TRIB1Q96RU8 372 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 GPATCH1Q9BRR8 931 aaKnown RBP19.9■□□□□ 0.78
ACTB-203ENST00000417101 FAIM2Q9BWQ8 316 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 EHD3Q9NZN3 535 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 ZNF629Q9UEG4 869 aaPredicted RBP19.9■□□□□ 0.78
ACTB-203ENST00000417101 PLLPQ9Y342 182 aa19.9■□□□□ 0.78
ACTB-203ENST00000417101 A0A087WUV0 522 aaPredicted RBP19.89■□□□□ 0.77
ACTB-203ENST00000417101 C2orf72A6NCS6 295 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 HSD17B3P37058 310 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 PEX19P40855 299 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 IST1P53990 364 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 CLCQ05315 142 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 SF3B4Q15427 424 aaKnown RBP eCLIP19.89■□□□□ 0.772e-27■■■■□ 24.5
ACTB-203ENST00000417101 TRMT12Q53H54 448 aaKnown RBP19.89■□□□□ 0.77
ACTB-203ENST00000417101 NHSL2Q5HYW2 709 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 TCHHL1Q5QJ38 904 aaPredicted RBP19.89■□□□□ 0.77
ACTB-203ENST00000417101 NSUN5P2Q63ZY6 315 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 POMZP3Q6PJE2 187 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 CDYL2Q8N8U2 506 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 FAM83FQ8NEG4 500 aaPredicted RBP19.89■□□□□ 0.77
ACTB-203ENST00000417101 OR52R1Q8NGF1 315 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 ABTB1Q969K4 478 aaPredicted RBP19.89■□□□□ 0.77
ACTB-203ENST00000417101 CNRIP1Q96F85 164 aaPredicted RBP19.89■□□□□ 0.77
ACTB-203ENST00000417101 WDYHV1Q96HA8 205 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 NODALQ96S42 347 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 GALNT9Q9HCQ5 603 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 VPS29Q9UBQ0 182 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 ZNF780BQ9Y6R6 833 aa19.89■□□□□ 0.77
ACTB-203ENST00000417101 HRNRQ86YZ3 2850 aaPredicted RBP19.88■□□□□ 0.77
ACTB-203ENST00000417101 MANBAO00462 879 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 ACOX3O15254 700 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 ICOSLGO75144 302 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 UGT2B11O75310 529 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 ESRRBO95718 433 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 PCSK2P16519 638 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 ZNF136P52737 540 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 NAGLUP54802 743 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 TRA2BP62995 288 aaKnown RBP19.88■□□□□ 0.77
ACTB-203ENST00000417101 MRPS35P82673 323 aaKnown RBP19.88■□□□□ 0.77
ACTB-203ENST00000417101 FBXL19-AS1Q494R0 122 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 SLC30A6Q6NXT4 461 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 ZNF592Q92610 1267 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 CTHRC1Q96CG8 243 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 ZNF681Q96N22 645 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 OSBPL11Q9BXB4 747 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 CLEC4MQ9H2X3 399 aaPredicted RBP19.88■□□□□ 0.77
ACTB-203ENST00000417101 EPB41L4BQ9H329 900 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 SERHLQ9NQF3 203 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 PFDN4Q9NQP4 134 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 KLRF1Q9NZS2 232 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 MAPRE3Q9UPY8 281 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 EXPH5Q8NEV8 1989 aa19.88■□□□□ 0.77
ACTB-203ENST00000417101 MED12Q93074 2177 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 EXOC1LA0A1B0GW35 172 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 CD8B2A6NJW9 211 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 SNPHO15079 494 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 SUPT7LO94864 414 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 KRT6AP02538 564 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 KRT6BP04259 564 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 CHN1P15882 459 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 PTGDSP41222 190 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 PPICP45877 212 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 KRT6CP48668 564 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 EMDP50402 254 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 FLYWCH1Q4VC44 716 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 UNC50Q53HI1 259 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 TMEM81Q6P7N7 255 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 LIME1Q9H400 295 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 RASSF1Q9NS23 344 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 CCM2LQ9NUG4 571 aaPredicted RBP19.87■□□□□ 0.77
ACTB-203ENST00000417101 HEY2Q9UBP5 337 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 PRODH2Q9UF12 536 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 FETUBQ9UGM5 382 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 UTS2RQ9UKP6 389 aa19.87■□□□□ 0.77
ACTB-203ENST00000417101 PRAMEF25A6NGN4 478 aa19.86■□□□□ 0.77
ACTB-203ENST00000417101 HSD3B1P14060 373 aa19.86■□□□□ 0.77
ACTB-203ENST00000417101 TAC1P20366 129 aa19.86■□□□□ 0.77
ACTB-203ENST00000417101 DRD5P21918 477 aa19.86■□□□□ 0.77
ACTB-203ENST00000417101 HSD3B2P26439 372 aa19.86■□□□□ 0.77
ACTB-203ENST00000417101 AGFG1P52594 562 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms