RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OR4F6Q8NGB9 312 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 TRPC4APQ8TEL6 797 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 MBD6Q96DN6 1003 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 OMA1Q96E52 524 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 ALPK1Q96QP1 1244 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 ITPAQ9BY32 194 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 BRINP2Q9C0B6 783 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 ACSS3Q9H6R3 686 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 FARSBQ9NSD9 589 aaKnown RBP13.51□□□□□ -0.25
RPS28-201ENST00000417088 NINJ2Q9NZG7 142 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 JKAMPQ9P055 326 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 BCAP29Q9UHQ4 241 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 CFL2Q9Y281 166 aa13.51□□□□□ -0.25
RPS28-201ENST00000417088 FLNAP21333 2647 aaKnown RBP13.51□□□□□ -0.25
RPS28-201ENST00000417088 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 GOLGA6L10A6NI86 522 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 EEF1E1-BLOC1S5C9J1V9 151 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 PPP6CO00743 305 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 SNPHO15079 494 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 EEF1E1O43324 174 aaKnown RBP13.5□□□□□ -0.25
RPS28-201ENST00000417088 GUCY1B2O75343 617 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 ERAL1O75616 437 aaKnown RBP13.5□□□□□ -0.25
RPS28-201ENST00000417088 IL18BPO95998 194 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 ACTL6AO96019 429 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 ATP1B1P05026 303 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 CPN1P15169 458 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 HOXB4P17483 251 aaPredicted RBP13.5□□□□□ -0.25
RPS28-201ENST00000417088 PHBP35232 272 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 OPRM1P35372 400 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
RPS28-201ENST00000417088 MAGEA12P43365 314 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 SLCO1A2P46721 670 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 SORDQ00796 357 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 DUSP2Q05923 314 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 GALNT1Q10472 559 aaPredicted RBP13.5□□□□□ -0.25
RPS28-201ENST00000417088 GGTA1PQ4G0N0 100 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 SLC30A6Q6NXT4 461 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 PAMR1Q6UXH9 720 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 RPS27LQ71UM5 84 aaKnown RBP13.5□□□□□ -0.25
RPS28-201ENST00000417088 CAMKMTQ7Z624 323 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 ADCY4Q8NFM4 1077 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 LINC01560Q8TB33 94 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 ZPLD1Q8TCW7 415 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 ISL2Q96A47 359 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 TM4SF18Q96CE8 201 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 CTHRC1Q96CG8 243 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 LCORQ96JN0 433 aaPredicted RBP13.5□□□□□ -0.25
RPS28-201ENST00000417088 DOCK7Q96N67 2140 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 ELOVL6Q9H5J4 265 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 GALNT9Q9HCQ5 603 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 DLL4Q9NR61 685 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 XPR1Q9UBH6 696 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 TMCO1Q9UM00 188 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 SLC12A4Q9UP95 1085 aa13.5□□□□□ -0.25
RPS28-201ENST00000417088 ACOX3O15254 700 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 SMIM24O75264 130 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 UGT2B11O75310 529 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 CBX7O95931 251 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 PDYNP01213 254 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 RPS17P08708 135 aaKnown RBP13.49□□□□□ -0.25
RPS28-201ENST00000417088 RHOXF2BP0C7M4 288 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 TMIGD3P0DMS9 266 aaPredicted RBP13.49□□□□□ -0.25
RPS28-201ENST00000417088 CYP4B1P13584 511 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 CSNK2A2P19784 350 aaPredicted RBP13.49□□□□□ -0.25
RPS28-201ENST00000417088 CNTFP26441 200 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 ETF1P62495 437 aaKnown RBP13.49□□□□□ -0.25
RPS28-201ENST00000417088 ADAM8P78325 824 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 PLCXD2Q0VAA5 305 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 FOXF2Q12947 444 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 SNTA1Q13424 505 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 RCAN2Q14206 197 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 LTB4RQ15722 352 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 TRMT12Q53H54 448 aaKnown RBP13.49□□□□□ -0.25
RPS28-201ENST00000417088 FAM219BQ5XKK7 198 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 SYT10Q6XYQ8 523 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 C17orf53Q8N3J3 647 aaPredicted RBP13.49□□□□□ -0.25
RPS28-201ENST00000417088 SLC44A1Q8WWI5 657 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 TUBA1CQ9BQE3 449 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 LRRC1Q9BTT6 524 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 FUT8Q9BYC5 575 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 SERHLQ9NQF3 203 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 EHD3Q9NZN3 535 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 MAPRE3Q9UPY8 281 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 EXO1Q9UQ84 846 aaKnown RBP13.49□□□□□ -0.25
RPS28-201ENST00000417088 PLLPQ9Y342 182 aa13.49□□□□□ -0.25
RPS28-201ENST00000417088 CBR3O75828 277 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 ATE1O95260 518 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 RAF1P04049 648 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 INHBAP08476 426 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 COL6A2P12110 1019 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 PCSK2P16519 638 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 TSPAN8P19075 237 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 DRD5P21918 477 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 PPICP45877 212 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 EMDP50402 254 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 CDH13P55290 713 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 DCAF7P61962 342 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 FBXW10Q5XX13 1052 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms