RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 MRPL53Q96EL3 112 aaKnown RBP3.4□□□□□ -1.87
ATG4C-204ENST00000414558 ABCB8Q9NUT2 735 aa3.4□□□□□ -1.87
ATG4C-204ENST00000414558 VPS54Q9P1Q0 977 aa3.4□□□□□ -1.87
ATG4C-204ENST00000414558 TRIM49D1C9J1S8 452 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 PDXKO00764 312 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 EI24O14681 340 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 ZNF861PO60384 105 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 HSP90AB1P08238 724 aaKnown RBP3.39□□□□□ -1.87
ATG4C-204ENST00000414558 SERPINF2P08697 491 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 ZNF853P0CG23 659 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 ACADSBP45954 432 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 GNB2P62879 340 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 PSG7Q13046 419 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 ZIC1Q15915 447 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 FUT11Q495W5 492 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 GLYR1Q49A26 553 aaPredicted RBP3.39□□□□□ -1.87
ATG4C-204ENST00000414558 ENTHD1Q8IYW4 607 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 CFAP36Q96G28 342 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 HCAR1Q9BXC0 346 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 OPN3Q9H1Y3 402 aaPredicted RBP3.39□□□□□ -1.87
ATG4C-204ENST00000414558 DCLRE1BQ9H816 532 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 PDE10AQ9Y233 779 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 KAT6BQ8WYB5 2073 aa3.39□□□□□ -1.87
ATG4C-204ENST00000414558 B4DXG7 233 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 EMC8O43402 210 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 GMNNO75496 209 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 REC8O95072 547 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 SFTPBP07988 381 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 SERPINH1P50454 418 aaKnown RBP3.38□□□□□ -1.87
ATG4C-204ENST00000414558 EFNA3P52797 238 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 METAP1P53582 386 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 DIO3P55073 304 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 HAND2P61296 217 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 EXOSC7Q15024 291 aaKnown RBP3.38□□□□□ -1.87
ATG4C-204ENST00000414558 ZNF658BQ4V348 819 aaPredicted RBP3.38□□□□□ -1.87
ATG4C-204ENST00000414558 MOB1BQ7L9L4 216 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 TGIF2LYQ8IUE0 185 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 STHQ8IWL8 128 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 FNDC8Q8TC99 324 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 DPH7Q9BTV6 452 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 TSPY26PQ9H489 355 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 FOXA2Q9Y261 457 aaPredicted RBP3.38□□□□□ -1.87
ATG4C-204ENST00000414558 ARHGAP23Q9P227 1491 aa3.38□□□□□ -1.87
ATG4C-204ENST00000414558 A0A0U1RQK1 487 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 A4D1N5 150 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 CACNB4O00305 520 aaPredicted RBP3.37□□□□□ -1.87
ATG4C-204ENST00000414558 GHRP10912 638 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 IGHV1-2P23083 117 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 FCARP24071 287 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 HERV-K104P63124 156 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 KYAT1Q16773 422 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 ATRAIDQ6UW56 229 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 PIWIL3Q7Z3Z3 882 aaKnown RBP3.37□□□□□ -1.87
ATG4C-204ENST00000414558 SYCP3Q8IZU3 236 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 Q8N9L7 120 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 ZNF184Q99676 751 aaPredicted RBP3.37□□□□□ -1.87
ATG4C-204ENST00000414558 JPH2Q9BR39 696 aaPredicted RBP3.37□□□□□ -1.87
ATG4C-204ENST00000414558 TSPYL1Q9H0U9 437 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 PNPLA3Q9NST1 481 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 SLC2A6Q9UGQ3 507 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 LIPT1Q9Y234 373 aa3.37□□□□□ -1.87
ATG4C-204ENST00000414558 SYNJ2O15056 1496 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 A0A0A6YYC8 382 aaPredicted RBP3.36□□□□□ -1.87
ATG4C-204ENST00000414558 C11orf98E9PRG8 122 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 I3L1I5 382 aaPredicted RBP3.36□□□□□ -1.87
ATG4C-204ENST00000414558 IGHV3-23P01764 117 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 ASNSP08243 561 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 VCLP18206 1134 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 SLC26A2P50443 739 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 SCARB2Q14108 478 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 GK2Q14410 553 aaPredicted RBP3.36□□□□□ -1.87
ATG4C-204ENST00000414558 SMC1AQ14683 1233 aaKnown RBP3.36□□□□□ -1.87
ATG4C-204ENST00000414558 PRAMEF8Q5VWM4 474 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 PYROXD2Q8N2H3 581 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 EHD1Q9H4M9 534 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 COPS7BQ9H9Q2 264 aaPredicted RBP3.36□□□□□ -1.87
ATG4C-204ENST00000414558 CNIH4Q9P003 139 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 ERVK-18Q9QC07 812 aa3.36□□□□□ -1.87
ATG4C-204ENST00000414558 MRPS2Q9Y399 296 aaKnown RBP3.36□□□□□ -1.87
ATG4C-204ENST00000414558 ZFP37Q9Y6Q3 630 aaPredicted RBP3.36□□□□□ -1.87
ATG4C-204ENST00000414558 CFAP65Q6ZU64 1925 aaKnown RBP3.36□□□□□ -1.87
ATG4C-204ENST00000414558 RSPH10B2B2RC85 870 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 CHEK1O14757 476 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 CFLARO15519 480 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 RANBP6O60518 1105 aaKnown RBP3.35□□□□□ -1.87
ATG4C-204ENST00000414558 HOXB7P09629 217 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 RSPH10BP0C881 870 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 CCDC166P0CW27 439 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 OR3A4PP47883 348 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 STX1BP61266 288 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 MECOMQ03112 1051 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 YWHAHQ04917 246 aaPredicted RBP3.35□□□□□ -1.87
ATG4C-204ENST00000414558 EPC2Q52LR7 807 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 SBK1Q52WX2 424 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 C11orf88Q6PI97 169 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 MKXQ8IYA7 352 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 GOT1L1Q8NHS2 421 aaPredicted RBP3.35□□□□□ -1.87
ATG4C-204ENST00000414558 LHX4Q969G2 390 aa3.35□□□□□ -1.87
ATG4C-204ENST00000414558 ZWILCHQ9H900 591 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms