RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 FAM69BQ5VUD6 431 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 AGAP7PQ5VUJ5 663 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 MLIPQ5VWP3 458 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 ANKRD26P1Q6NSI1 321 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 RHBDD2Q6NTF9 364 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 FIGLAQ6QHK4 219 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 ASB18Q6ZVZ8 466 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 ANKRD13BQ86YJ7 626 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 RAB43Q86YS6 212 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 C10orf107Q8IVU9 208 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 CTAGE3PQ8IX95 158 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 ZBTB2Q8N680 514 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 TEX19Q8NA77 164 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 CEP70Q8NHQ1 597 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PROKR1Q8TCW9 393 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 LPGAT1Q92604 370 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 SLCO4A1Q96BD0 722 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 C12orf43Q96C57 262 aaKnown RBP4.99□□□□□ -1.61
LINC00342-201ENST00000412393 ROPN1LQ96C74 230 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 DACH2Q96NX9 599 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 SLC25A23Q9BV35 468 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 NPLQ9BXD5 320 aaPredicted RBP4.99□□□□□ -1.61
LINC00342-201ENST00000412393 ING2Q9H160 280 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 RPF2Q9H7B2 306 aaKnown RBP4.99□□□□□ -1.61
LINC00342-201ENST00000412393 COQ10BQ9H8M1 238 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 WDR41Q9HAD4 459 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PARVBQ9HBI1 364 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 INTS10Q9NVR2 710 aaKnown RBP4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PNPOQ9NVS9 261 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 GID8Q9NWU2 228 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 TMEM181Q9P2C4 612 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 IFT80Q9P2H3 777 aaPredicted RBP4.99□□□□□ -1.61
LINC00342-201ENST00000412393 GALPQ9UBC7 116 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 DHCR7Q9UBM7 475 aaKnown RBP4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PSME2Q9UL46 239 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PCDHGB4Q9UN71 923 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 SRPK3Q9UPE1 567 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 RUVBL2Q9Y230 463 aaKnown RBP4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PADI2Q9Y2J8 665 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 KLHL20Q9Y2M5 609 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 IFT52Q9Y366 437 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PTRH2Q9Y3E5 179 aaKnown RBP4.99□□□□□ -1.61
LINC00342-201ENST00000412393 UGT2A1Q9Y4X1 527 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PCDHGB5Q9Y5G0 923 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 PCDHGB1Q9Y5G3 927 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 SHANK1Q9Y566 2161 aa4.99□□□□□ -1.61
LINC00342-201ENST00000412393 LOC100653049A0A140TA62 436 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 ZCWPW2A0A1B0GU75 182 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 A0A1W2PPV9 198 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 A0A1W2PRX2 142 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 KRT87PA6NCN2 255 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 CCDC160A6NGH7 325 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 TRPC5OSA6NMA1 111 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 CENPBD1B2RD01 187 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 H3BMQ9 156 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 CNOT3O75175 753 aaKnown RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 MTRF1O75570 445 aaKnown RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 KRT34O76011 436 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 SUPT7LO94864 414 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 PRSS23O95084 383 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 MATN4O95460 622 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 CCDC159P0C7I6 412 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 OCM2P0CE71 109 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 OCMP0CE72 109 aaPredicted RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 UMPSP11172 480 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 FCGR1AP12314 374 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 HSD17B1P14061 328 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 ATP6V1B1P15313 513 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 HOXB6P17509 224 aaKnown RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 PGAM1P18669 254 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 NCF2P19878 526 aaPredicted RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 ACVR2AP27037 513 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 PSMB5P28074 263 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 EPHA3P29320 983 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 CMPK1P30085 196 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 OTX2P32243 289 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 SPRP35270 261 aaPredicted RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 FOLR3P41439 243 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 STT3AP46977 705 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 TMED10P49755 219 aaKnown RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 HLCSP50747 726 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 PGDP52209 483 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 HNRNPFP52597 415 aaKnown RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 ARSFP54793 590 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 GPR85P60893 370 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 CTBP1Q13363 440 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 ATP1A4Q13733 1029 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 GBX1Q14549 363 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 IGFBP7Q16270 282 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 RGS21Q2M5E4 152 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 TTLL9Q3SXZ7 439 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 NKAIN1Q4KMZ8 207 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 ZC3H12BQ5HYM0 836 aaKnown RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 TCTE1Q5JU00 501 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 SAMD4BQ5PRF9 694 aaKnown RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 TCHHL1Q5QJ38 904 aaPredicted RBP4.98□□□□□ -1.61
LINC00342-201ENST00000412393 FCRL6Q6DN72 434 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 ZNF470Q6ECI4 717 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 PRMT9Q6P2P2 845 aa4.98□□□□□ -1.61
LINC00342-201ENST00000412393 C16orf87Q6PH81 154 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms