RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CT45A9P0DMV2 189 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 PRPS1L1P21108 318 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 RPL3P39023 403 aaKnown RBP12.14□□□□□ -0.47
HDAC8-210ENST00000412342 MLC1Q15049 377 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 NTRK2Q16620 822 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 CT45A2Q5DJT8 189 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 NPSR1Q6W5P4 371 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 TMEM64Q6YI46 380 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 RTL4Q6ZR62 310 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 GOLM1Q8NBJ4 401 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 ACTRT2Q8TDY3 377 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 FAR1Q8WVX9 515 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 ZBED6CLQ96FA7 236 aaPredicted RBP12.14□□□□□ -0.47
HDAC8-210ENST00000412342 SGCZQ96LD1 299 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 OR52B2Q96RD2 323 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 FOLH1BQ9HBA9 442 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 SIRT3Q9NTG7 399 aaPredicted RBP12.14□□□□□ -0.47
HDAC8-210ENST00000412342 AIG1Q9NVV5 245 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 NTMQ9P121 344 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 PRODH2Q9UF12 536 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 ERVK-11Q9UQG0 969 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 USH1CQ9Y6N9 552 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 A0A0G2JMM0 328 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 A0A1W2PPB8 328 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 A0A1W2PRS3 328 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 PINLYPA6NC86 204 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 FRG2CA6NGY1 282 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 KIR3DP1A8MWS1 328 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 TCP11X1B4DZS4 312 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 ATP8B1O43520 1251 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 WISP2O76076 250 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 CCL3P10147 92 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 EFNA1P20827 205 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 DRD5P21918 477 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 MST1P26927 711 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 ABCD3P28288 659 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 MAP3K8P41279 467 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 PPICP45877 212 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 WNT3P56703 355 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 CORO7P57737 925 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 DCAF7P61962 342 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 PSG6Q00889 435 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 SRSF11Q05519 484 aaKnown RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 HSPB3Q12988 150 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 NNATQ16517 81 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 MAPKAPK3Q16644 382 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 RNFT1Q5M7Z0 435 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 EXOSC6Q5RKV6 272 aaKnown RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 CPTPQ5TA50 214 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 HLA-DQA1Q5Y7H0 255 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 EPGNQ6UW88 154 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 FAM180AQ6UWF9 173 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 SIAH3Q8IW03 269 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 DND1Q8IYX4 353 aaKnown RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 TAGAPQ8N103 731 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 CPSF7Q8N684 471 aaKnown RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 BCORP1Q8N888 145 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 GALNT11Q8NCW6 608 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 OR10G3Q8NGC4 313 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 DNAJB8Q8NHS0 232 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 PSMA8Q8TAA3 256 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 PAQR8Q8TEZ7 354 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 DYDC1Q8WWB3 177 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 NR4A3Q92570 626 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 HOXB13Q92826 284 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 TMEM125Q96AQ2 219 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 NTNG2Q96CW9 530 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 GIMAP5Q96F15 307 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 LCORQ96JN0 433 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 TEX37Q96LM6 180 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 BHLHE41Q9C0J9 482 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 TIMMDC1Q9NPL8 285 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 KLF13Q9Y2Y9 288 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 NPFFR2Q9Y5X5 522 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 GPR45Q9Y5Y3 372 aa12.13□□□□□ -0.47
HDAC8-210ENST00000412342 CHCHD2Q9Y6H1 151 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-210ENST00000412342 ACOX3O15254 700 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 PEX1O43933 1283 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 SCN2BO60939 215 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 COQ9O75208 318 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 WISP1O95388 367 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 CBX6O95503 412 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 NAGAP17050 411 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 UQCRFS1P47985 274 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 MEOX1P50221 254 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 MANFP55145 182 aaKnown RBP12.12□□□□□ -0.47
HDAC8-210ENST00000412342 GPR85P60893 370 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 PHC1P78364 1004 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 FAM47EQ6ZV65 393 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 SPATA19Q7Z5L4 167 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 PRR22Q8IZ63 422 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 ZFP62Q8NB50 900 aaPredicted RBP12.12□□□□□ -0.47
HDAC8-210ENST00000412342 OR8J2Q8NGG1 315 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 ZFP28Q8NHY6 868 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 TESCQ96BS2 214 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 HSPBAP1Q96EW2 488 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms