RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZNF227Q86WZ6 799 aa10.07□□□□□ -0.8
CHMP3-205ENST00000409810 WDR75Q8IWA0 830 aaKnown RBP10.07□□□□□ -0.8
CHMP3-205ENST00000409810 ST6GALNAC3Q8NDV1 305 aa10.07□□□□□ -0.8
CHMP3-205ENST00000409810 CIDECQ96AQ7 238 aaPredicted RBP10.07□□□□□ -0.8
CHMP3-205ENST00000409810 TAAR6Q96RI8 345 aa10.07□□□□□ -0.8
CHMP3-205ENST00000409810 ITPAQ9BY32 194 aa10.07□□□□□ -0.8
CHMP3-205ENST00000409810 NEUROD4Q9HD90 331 aa10.07□□□□□ -0.8
CHMP3-205ENST00000409810 NTNG1Q9Y2I2 539 aa10.07□□□□□ -0.8
CHMP3-205ENST00000409810 HELZ2Q9BYK8 2649 aaKnown RBP10.07□□□□□ -0.8
CHMP3-205ENST00000409810 DNAJC13O75165 2243 aa10.07□□□□□ -0.8
CHMP3-205ENST00000409810 ANKUB1A6NFN9 424 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 PYCARD-AS1I3L0S3 204 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 ACOT7O00154 380 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 SDHDO14521 159 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 PEX1O43933 1283 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 ERN1O75460 977 aaKnown RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 ZNF24P17028 368 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 NAGAP17050 411 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 DRD5P21918 477 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 ABCD3P28288 659 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 KRT20P35900 424 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 FRKP42685 505 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 PPICP45877 212 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 MEOX1P50221 254 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 EMDP50402 254 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 CLNS1AP54105 237 aaKnown RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 C21orf58P58505 322 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 PMP22Q01453 160 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 SRSF11Q05519 484 aaKnown RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 PLCXD2Q0VAA5 305 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 ZNF155Q12901 538 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 MLC1Q15049 377 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 ZNHIT3Q15649 155 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 NTRK2Q16620 822 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 PRSS53Q2L4Q9 553 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 DPY19L1Q2PZI1 675 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 ZNF791Q3KP31 576 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 LSM12Q3MHD2 195 aaKnown RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 TBCELQ5QJ74 424 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 SLC22A10Q63ZE4 541 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 MDGA2Q7Z553 956 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 SPATA19Q7Z5L4 167 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 SULF2Q8IWU5 870 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 OR2L13Q8N349 312 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 FAM13CQ8NE31 585 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 OR7G2Q8NG99 324 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 CEP70Q8NHQ1 597 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 ELP4Q96EB1 424 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 MAGEB18Q96M61 343 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 FRMD6Q96NE9 622 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 BTBD9Q96Q07 612 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 SECISBP2Q96T21 854 aaKnown RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 SLX1AQ9BQ83 275 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 DPY30Q9C005 99 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 BHLHE41Q9C0J9 482 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 NXF5Q9H1B4 397 aaKnown RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 FOLH1BQ9HBA9 442 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 C3orf14Q9HBI5 128 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 CNIH4Q9P003 139 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 C19orf53Q9UNZ5 99 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-205ENST00000409810 DTX4Q9Y2E6 619 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 NPFFR2Q9Y5X5 522 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 POLEQ07864 2286 aa10.06□□□□□ -0.8
CHMP3-205ENST00000409810 HIVEP3Q5T1R4 2406 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 MYO18BQ8IUG5 2567 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 A0A1W2PRB8 838 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 TFECO14948 347 aaPredicted RBP10.05□□□□□ -0.8
CHMP3-205ENST00000409810 TO15178 435 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 ATP8B1O43520 1251 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 ZNF354AO60765 605 aaPredicted RBP10.05□□□□□ -0.8
CHMP3-205ENST00000409810 ABCB7O75027 752 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 PPM1BO75688 479 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 FREM3P0C091 2139 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 CNR1P21554 472 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 GNLYP22749 145 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 EPHA3P29320 983 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 GPR85P60893 370 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 MRPS22P82650 360 aaKnown RBP10.05□□□□□ -0.8
CHMP3-205ENST00000409810 PRR5P85299 388 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 PLGLB1Q02325 96 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 RBPJQ06330 500 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 DUSP8Q13202 625 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 NNATQ16517 81 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 VPS26BQ4G0F5 336 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 KRTCAP3Q53RY4 240 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 FHL5Q5TD97 284 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 ZNF324BQ6AW86 544 aaPredicted RBP10.05□□□□□ -0.8
CHMP3-205ENST00000409810 NXNQ6DKJ4 435 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 LYPD8Q6UX82 237 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 RGS9BPQ6ZS82 235 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 FAM47EQ6ZV65 393 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 ACAD11Q709F0 780 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 ZNF551Q7Z340 670 aaPredicted RBP10.05□□□□□ -0.8
CHMP3-205ENST00000409810 SZRD1Q7Z422 152 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 CAMKMTQ7Z624 323 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 RIMKLAQ8IXN7 391 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 SLC34A3Q8N130 599 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 FBXW8Q8N3Y1 598 aa10.05□□□□□ -0.8
CHMP3-205ENST00000409810 CPSF7Q8N684 471 aaKnown RBP10.05□□□□□ -0.8
CHMP3-205ENST00000409810 ARFGAP2Q8N6H7 521 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms