RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 GPR55Q9Y2T6 319 aaPredicted RBP20.64■□□□□ 0.89
PTCD3-203ENST00000409783 EDF1O60869 148 aaKnown RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 TGDSO95455 350 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 DDX5P17844 614 aaKnown RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 MANFP55145 182 aaKnown RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 WNT3P56703 355 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 LSM12Q3MHD2 195 aaKnown RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 TMEM198Q66K66 360 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 TMEM178AQ8NBL3 297 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 CEP70Q8NHQ1 597 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 ZFP28Q8NHY6 868 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 GRHL3Q8TE85 626 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 TESCQ96BS2 214 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 SPACA9Q96E40 222 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 LCORQ96JN0 433 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 TEX37Q96LM6 180 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 BTBD9Q96Q07 612 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 PRPF18Q99633 342 aaKnown RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 DPY30Q9C005 99 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 BHLHE41Q9C0J9 482 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 FOLH1BQ9HBA9 442 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 ATAD3AQ9NVI7 634 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 ERVK-11Q9UQG0 969 aa20.63■□□□□ 0.89
PTCD3-203ENST00000409783 COPG1Q9Y678 874 aaKnown RBP20.63■□□□□ 0.89
PTCD3-203ENST00000409783 ASPDHA6ND91 283 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 TCP11X1B4DZS4 312 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 TO15178 435 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 DIAPH2O60879 1101 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 SCN2BO60939 215 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 CT45A8P0DMV1 189 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 CT45A9P0DMV2 189 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 DRD5P21918 477 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 IDH3AP50213 366 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 UFM1P61960 85 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 DCAF7P61962 342 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 PHC1P78364 1004 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 FOXK1P85037 733 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 PMP22Q01453 160 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 MAPKAPK3Q16644 382 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 CT45A2Q5DJT8 189 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 ZNF324BQ6AW86 544 aaPredicted RBP20.62■□□□□ 0.89
PTCD3-203ENST00000409783 NXNQ6DKJ4 435 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 NPSR1Q6W5P4 371 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 RTL4Q6ZR62 310 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 TAGAPQ8N103 731 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 NATD1Q8N6N6 113 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 GOLM1Q8NBJ4 401 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 PSD4Q8NDX1 1056 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 OR8J2Q8NGG1 315 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 PSMA8Q8TAA3 256 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 TMEM125Q96AQ2 219 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 SGCZQ96LD1 299 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 EBF4Q9BQW3 602 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 DUSP26Q9BV47 211 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 CLMPQ9H6B4 373 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 DEPPQ9NTK1 212 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 TAS2R9Q9NYW1 312 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 NPFFR2Q9Y5X5 522 aa20.62■□□□□ 0.89
PTCD3-203ENST00000409783 A0A1W2PRB8 838 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 FRG2CA6NGY1 282 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 COQ9O75208 318 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 RASAL1O95294 804 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 IL12AP29459 219 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 CORO7P57737 925 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 IGFBP7Q16270 282 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 NNATQ16517 81 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 NTRK2Q16620 822 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 OR4F3Q6IEY1 312 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 OR5P2Q8WZ92 322 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 HSPBAP1Q96EW2 488 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 MAGED4Q96JG8 741 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 TIMMDC1Q9NPL8 285 aa20.61■□□□□ 0.89
PTCD3-203ENST00000409783 DDX18Q9NVP1 670 aaKnown RBP20.61■□□□□ 0.89
PTCD3-203ENST00000409783 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 ERN1O75460 977 aaKnown RBP20.6■□□□□ 0.89
PTCD3-203ENST00000409783 C6orf47O95873 294 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 CCL3P10147 92 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 ABCD3P28288 659 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 GPC1P35052 558 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 AQP5P55064 265 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 PSG6Q00889 435 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 PGS1Q32NB8 556 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-203ENST00000409783 SULF2Q8IWU5 870 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 DND1Q8IYX4 353 aaKnown RBP20.6■□□□□ 0.89
PTCD3-203ENST00000409783 PRR22Q8IZ63 422 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 PAQR8Q8TEZ7 354 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 FAR1Q8WVX9 515 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 HOXB13Q92826 284 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-203ENST00000409783 GIMAP5Q96F15 307 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 MARK4Q96L34 752 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 FRMD6Q96NE9 622 aa20.6■□□□□ 0.89
PTCD3-203ENST00000409783 KLF13Q9Y2Y9 288 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-203ENST00000409783 CHCHD2Q9Y6H1 151 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-203ENST00000409783 PYCARD-AS1I3L0S3 204 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 DYNC1I1O14576 645 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 ACOX3O15254 700 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 IDO1P14902 403 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 MAP3K8P41279 467 aa20.59■□□□□ 0.89
PTCD3-203ENST00000409783 CLNS1AP54105 237 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms